Gene : WCRKC2 A. thaliana TAIR10
Primary Identifier:  ? AT5G04260 Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC
Genomic Order:  350 Name:  ? AT5G04260
Secondary Identifier:  ? PAC:19670764
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04260 0.5kb upstream 0.5kb upstream 1893 true Chr5: 1178644-1180536 Arabidopsis thaliana
AT5G04260 0.5kb upstream 0.5kb upstream 500 false Chr5: 1180037-1180536 Arabidopsis thaliana
AT5G04260 0.5kb downstream 0.5kb downstream 1893 true Chr5: 1178144-1180036 Arabidopsis thaliana
AT5G04260 0.5kb downstream 0.5kb downstream 500 false Chr5: 1178144-1178643 Arabidopsis thaliana
AT5G04260 1.0kb upstream 1.0kb upstream 2393 true Chr5: 1178644-1181036 Arabidopsis thaliana
AT5G04260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1180037-1181036 Arabidopsis thaliana
AT5G04260 1.0kb downstream 1.0kb downstream 2393 true Chr5: 1177644-1180036 Arabidopsis thaliana
AT5G04260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1177644-1178643 Arabidopsis thaliana
AT5G04260 2.0kb upstream 2.0kb upstream 3393 true Chr5: 1178644-1182036 Arabidopsis thaliana
AT5G04260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1180037-1182036 Arabidopsis thaliana
AT5G04260 2.0kb downstream 2.0kb downstream 3393 true Chr5: 1176644-1180036 Arabidopsis thaliana
AT5G04260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1176644-1178643 Arabidopsis thaliana
AT5G04260 5.0kb upstream 5.0kb upstream 6393 true Chr5: 1178644-1185036 Arabidopsis thaliana
AT5G04260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1180037-1185036 Arabidopsis thaliana
AT5G04260 5.0kb downstream 5.0kb downstream 6393 true Chr5: 1173644-1180036 Arabidopsis thaliana
AT5G04260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1173644-1178643 Arabidopsis thaliana
AT5G04260 10.0kb upstream 10.0kb upstream 11393 true Chr5: 1178644-1190036 Arabidopsis thaliana
AT5G04260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1180037-1190036 Arabidopsis thaliana
AT5G04260 10.0kb downstream 10.0kb downstream 11393 true Chr5: 1168644-1180036 Arabidopsis thaliana
AT5G04260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1168644-1178643 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370617 5261 Brassicaceae View MSA
123834100 5264 Brassicales-Malvales View MSA
124345409 5266 SBM View MSA
124244940 5268 Malvidae View MSA
124062487 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.542       High
cufflinks 10.345        
cufflinks 17.565        
cufflinks 10.775        
cufflinks 18.36        
cufflinks 10.111        

0 Strain