Gene : AT5G04320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Genomic Order:  356
Name:  ? AT5G04320 Secondary Identifier:  ? PAC:19668812
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04320 0.5kb upstream 0.5kb upstream 3882 true Chr5: 1208697-1212578 Arabidopsis thaliana
AT5G04320 0.5kb upstream 0.5kb upstream 500 false Chr5: 1208697-1209196 Arabidopsis thaliana
AT5G04320 0.5kb downstream 0.5kb downstream 3882 true Chr5: 1209197-1213078 Arabidopsis thaliana
AT5G04320 0.5kb downstream 0.5kb downstream 500 false Chr5: 1212579-1213078 Arabidopsis thaliana
AT5G04320 1.0kb upstream 1.0kb upstream 4382 true Chr5: 1208197-1212578 Arabidopsis thaliana
AT5G04320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1208197-1209196 Arabidopsis thaliana
AT5G04320 1.0kb downstream 1.0kb downstream 4382 true Chr5: 1209197-1213578 Arabidopsis thaliana
AT5G04320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1212579-1213578 Arabidopsis thaliana
AT5G04320 2.0kb upstream 2.0kb upstream 5382 true Chr5: 1207197-1212578 Arabidopsis thaliana
AT5G04320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1207197-1209196 Arabidopsis thaliana
AT5G04320 2.0kb downstream 2.0kb downstream 5382 true Chr5: 1209197-1214578 Arabidopsis thaliana
AT5G04320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1212579-1214578 Arabidopsis thaliana
AT5G04320 5.0kb upstream 5.0kb upstream 8382 true Chr5: 1204197-1212578 Arabidopsis thaliana
AT5G04320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1204197-1209196 Arabidopsis thaliana
AT5G04320 5.0kb downstream 5.0kb downstream 8382 true Chr5: 1209197-1217578 Arabidopsis thaliana
AT5G04320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1212579-1217578 Arabidopsis thaliana
AT5G04320 10.0kb upstream 10.0kb upstream 13382 true Chr5: 1199197-1212578 Arabidopsis thaliana
AT5G04320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1199197-1209196 Arabidopsis thaliana
AT5G04320 10.0kb downstream 10.0kb downstream 13382 true Chr5: 1209197-1222578 Arabidopsis thaliana
AT5G04320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1212579-1222578 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122371374 5261 Brassicaceae View MSA
123838720 5264 Brassicales-Malvales View MSA
124322493 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.335        
cufflinks 3.999        
cufflinks 2.162        
cufflinks 4.229       High
cufflinks 2.074       Low
cufflinks 4.047        

0 Strain