Gene : AT5G04020 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33923//PTHR33923:SF3 - FAMILY NOT NAMED // CALMODULIN-BINDING PROTEIN Genomic Order:  324
Name:  ? AT5G04020 Secondary Identifier:  ? PAC:19670588
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04020 0.5kb upstream 0.5kb upstream 5436 true Chr5: 1081611-1087046 Arabidopsis thaliana
AT5G04020 0.5kb upstream 0.5kb upstream 500 false Chr5: 1086547-1087046 Arabidopsis thaliana
AT5G04020 0.5kb downstream 0.5kb downstream 5436 true Chr5: 1081111-1086546 Arabidopsis thaliana
AT5G04020 0.5kb downstream 0.5kb downstream 500 false Chr5: 1081111-1081610 Arabidopsis thaliana
AT5G04020 1.0kb upstream 1.0kb upstream 5936 true Chr5: 1081611-1087546 Arabidopsis thaliana
AT5G04020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1086547-1087546 Arabidopsis thaliana
AT5G04020 1.0kb downstream 1.0kb downstream 5936 true Chr5: 1080611-1086546 Arabidopsis thaliana
AT5G04020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1080611-1081610 Arabidopsis thaliana
AT5G04020 2.0kb upstream 2.0kb upstream 6936 true Chr5: 1081611-1088546 Arabidopsis thaliana
AT5G04020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1086547-1088546 Arabidopsis thaliana
AT5G04020 2.0kb downstream 2.0kb downstream 6936 true Chr5: 1079611-1086546 Arabidopsis thaliana
AT5G04020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1079611-1081610 Arabidopsis thaliana
AT5G04020 5.0kb upstream 5.0kb upstream 9936 true Chr5: 1081611-1091546 Arabidopsis thaliana
AT5G04020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1086547-1091546 Arabidopsis thaliana
AT5G04020 5.0kb downstream 5.0kb downstream 9936 true Chr5: 1076611-1086546 Arabidopsis thaliana
AT5G04020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1076611-1081610 Arabidopsis thaliana
AT5G04020 10.0kb upstream 10.0kb upstream 14936 true Chr5: 1081611-1096546 Arabidopsis thaliana
AT5G04020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1086547-1096546 Arabidopsis thaliana
AT5G04020 10.0kb downstream 10.0kb downstream 14936 true Chr5: 1071611-1086546 Arabidopsis thaliana
AT5G04020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1071611-1081610 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367533 5261 Brassicaceae View MSA
123828490 5264 Brassicales-Malvales View MSA
124339332 5266 SBM View MSA
124241150 5268 Malvidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.981       High
cufflinks 6.661       Low
cufflinks 11.73        
cufflinks 8.141        
cufflinks 13.705        
cufflinks 9.999        

0 Strain