Gene : IQD12 A. thaliana TAIR10
Primary Identifier:  ? AT5G03960 Defline:  (1 of 2) PTHR32295//PTHR32295:SF41 - FAMILY NOT NAMED // CALMODULIN BINDING PROTEIN-RELATED
Genomic Order:  317 Name:  ? AT5G03960
Secondary Identifier:  ? PAC:19670738
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03960 0.5kb upstream 0.5kb upstream 2219 true Chr5: 1068260-1070478 Arabidopsis thaliana
AT5G03960 0.5kb upstream 0.5kb upstream 500 false Chr5: 1069979-1070478 Arabidopsis thaliana
AT5G03960 0.5kb downstream 0.5kb downstream 2219 true Chr5: 1067760-1069978 Arabidopsis thaliana
AT5G03960 0.5kb downstream 0.5kb downstream 500 false Chr5: 1067760-1068259 Arabidopsis thaliana
AT5G03960 1.0kb upstream 1.0kb upstream 2719 true Chr5: 1068260-1070978 Arabidopsis thaliana
AT5G03960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1069979-1070978 Arabidopsis thaliana
AT5G03960 1.0kb downstream 1.0kb downstream 2719 true Chr5: 1067260-1069978 Arabidopsis thaliana
AT5G03960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1067260-1068259 Arabidopsis thaliana
AT5G03960 2.0kb upstream 2.0kb upstream 3719 true Chr5: 1068260-1071978 Arabidopsis thaliana
AT5G03960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1069979-1071978 Arabidopsis thaliana
AT5G03960 2.0kb downstream 2.0kb downstream 3719 true Chr5: 1066260-1069978 Arabidopsis thaliana
AT5G03960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1066260-1068259 Arabidopsis thaliana
AT5G03960 5.0kb upstream 5.0kb upstream 6719 true Chr5: 1068260-1074978 Arabidopsis thaliana
AT5G03960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1069979-1074978 Arabidopsis thaliana
AT5G03960 5.0kb downstream 5.0kb downstream 6719 true Chr5: 1063260-1069978 Arabidopsis thaliana
AT5G03960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1063260-1068259 Arabidopsis thaliana
AT5G03960 10.0kb upstream 10.0kb upstream 11719 true Chr5: 1068260-1079978 Arabidopsis thaliana
AT5G03960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1069979-1079978 Arabidopsis thaliana
AT5G03960 10.0kb downstream 10.0kb downstream 11719 true Chr5: 1058260-1069978 Arabidopsis thaliana
AT5G03960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1058260-1068259 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376724 5261 Brassicaceae View MSA
123829263 5264 Brassicales-Malvales View MSA
124344034 5266 SBM View MSA
124238420 5268 Malvidae View MSA
124064694 5270 Rosid View MSA
123736555 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.557        
cufflinks 0.963        
cufflinks 0.516        
cufflinks 1.564       High
cufflinks 0.197     Low Low
cufflinks 1.472        

0 Strain