Gene : AHBP-1B A. thaliana TAIR10
Primary Identifier:  ? AT5G06950 Defline:  (1 of 2) PTHR22952:SF206 - TRANSCRIPTION FACTOR TGA2
Genomic Order:  629 Name:  ? AT5G06950
Secondary Identifier:  ? PAC:19673024
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06950 0.5kb upstream 0.5kb upstream 4029 true Chr5: 2150525-2154553 Arabidopsis thaliana
AT5G06950 0.5kb upstream 0.5kb upstream 500 false Chr5: 2150525-2151024 Arabidopsis thaliana
AT5G06950 0.5kb downstream 0.5kb downstream 4029 true Chr5: 2151025-2155053 Arabidopsis thaliana
AT5G06950 0.5kb downstream 0.5kb downstream 500 false Chr5: 2154554-2155053 Arabidopsis thaliana
AT5G06950 1.0kb upstream 1.0kb upstream 4529 true Chr5: 2150025-2154553 Arabidopsis thaliana
AT5G06950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2150025-2151024 Arabidopsis thaliana
AT5G06950 1.0kb downstream 1.0kb downstream 4529 true Chr5: 2151025-2155553 Arabidopsis thaliana
AT5G06950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2154554-2155553 Arabidopsis thaliana
AT5G06950 2.0kb upstream 2.0kb upstream 5529 true Chr5: 2149025-2154553 Arabidopsis thaliana
AT5G06950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2149025-2151024 Arabidopsis thaliana
AT5G06950 2.0kb downstream 2.0kb downstream 5529 true Chr5: 2151025-2156553 Arabidopsis thaliana
AT5G06950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2154554-2156553 Arabidopsis thaliana
AT5G06950 5.0kb upstream 5.0kb upstream 8529 true Chr5: 2146025-2154553 Arabidopsis thaliana
AT5G06950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2146025-2151024 Arabidopsis thaliana
AT5G06950 5.0kb downstream 5.0kb downstream 8529 true Chr5: 2151025-2159553 Arabidopsis thaliana
AT5G06950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2154554-2159553 Arabidopsis thaliana
AT5G06950 10.0kb upstream 10.0kb upstream 13529 true Chr5: 2141025-2154553 Arabidopsis thaliana
AT5G06950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2141025-2151024 Arabidopsis thaliana
AT5G06950 10.0kb downstream 10.0kb downstream 13529 true Chr5: 2151025-2164553 Arabidopsis thaliana
AT5G06950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2154554-2164553 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376027 5261 Brassicaceae View MSA
123838578 5264 Brassicales-Malvales View MSA
124348363 5266 SBM View MSA
124249581 5268 Malvidae View MSA
124069977 5270 Rosid View MSA
123742396 5271 Pentapetalae View MSA
122790944 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.133        
cufflinks 1.425        
cufflinks 0.951       Low
cufflinks 1.728       High
cufflinks 0.985        
cufflinks 1.491        

0 Strain