Gene : AT5G06930 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31344:SF4 - NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  627
Name:  ? AT5G06930 Secondary Identifier:  ? PAC:19665995
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06930 0.5kb upstream 0.5kb upstream 3541 true Chr5: 2144499-2148039 Arabidopsis thaliana
AT5G06930 0.5kb upstream 0.5kb upstream 500 false Chr5: 2144499-2144998 Arabidopsis thaliana
AT5G06930 0.5kb downstream 0.5kb downstream 3541 true Chr5: 2144999-2148539 Arabidopsis thaliana
AT5G06930 0.5kb downstream 0.5kb downstream 500 false Chr5: 2148040-2148539 Arabidopsis thaliana
AT5G06930 1.0kb upstream 1.0kb upstream 4041 true Chr5: 2143999-2148039 Arabidopsis thaliana
AT5G06930 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2143999-2144998 Arabidopsis thaliana
AT5G06930 1.0kb downstream 1.0kb downstream 4041 true Chr5: 2144999-2149039 Arabidopsis thaliana
AT5G06930 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2148040-2149039 Arabidopsis thaliana
AT5G06930 2.0kb upstream 2.0kb upstream 5041 true Chr5: 2142999-2148039 Arabidopsis thaliana
AT5G06930 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2142999-2144998 Arabidopsis thaliana
AT5G06930 2.0kb downstream 2.0kb downstream 5041 true Chr5: 2144999-2150039 Arabidopsis thaliana
AT5G06930 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2148040-2150039 Arabidopsis thaliana
AT5G06930 5.0kb upstream 5.0kb upstream 8041 true Chr5: 2139999-2148039 Arabidopsis thaliana
AT5G06930 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2139999-2144998 Arabidopsis thaliana
AT5G06930 5.0kb downstream 5.0kb downstream 8041 true Chr5: 2144999-2153039 Arabidopsis thaliana
AT5G06930 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2148040-2153039 Arabidopsis thaliana
AT5G06930 10.0kb upstream 10.0kb upstream 13041 true Chr5: 2134999-2148039 Arabidopsis thaliana
AT5G06930 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2134999-2144998 Arabidopsis thaliana
AT5G06930 10.0kb downstream 10.0kb downstream 13041 true Chr5: 2144999-2158039 Arabidopsis thaliana
AT5G06930 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2148040-2158039 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511038 5273 Angiosperm View MSA
122371487 5261 Brassicaceae View MSA
123800171 5264 Brassicales-Malvales View MSA
124297616 5266 SBM View MSA
124149455 5268 Malvidae View MSA
123875262 5270 Rosid View MSA
123459116 5271 Pentapetalae View MSA
122494511 5272 Eudicot View MSA
120784107 5274 Embryophyte View MSA
122826043 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.785        
cufflinks 2.834        
cufflinks 2.686        
cufflinks 4.634        
cufflinks 1.708       Low
cufflinks 6.994       High

0 Strain