Gene : WCRKC1 A. thaliana TAIR10
Primary Identifier:  ? AT5G06690 Defline:  (1 of 1) PTHR10438:SF283 - THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC
Genomic Order:  602 Name:  ? AT5G06690
Secondary Identifier:  ? PAC:19667149
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06690 0.5kb upstream 0.5kb upstream 1956 true Chr5: 2060501-2062456 Arabidopsis thaliana
AT5G06690 0.5kb upstream 0.5kb upstream 500 false Chr5: 2061957-2062456 Arabidopsis thaliana
AT5G06690 0.5kb downstream 0.5kb downstream 1956 true Chr5: 2060001-2061956 Arabidopsis thaliana
AT5G06690 0.5kb downstream 0.5kb downstream 500 false Chr5: 2060001-2060500 Arabidopsis thaliana
AT5G06690 1.0kb upstream 1.0kb upstream 2456 true Chr5: 2060501-2062956 Arabidopsis thaliana
AT5G06690 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2061957-2062956 Arabidopsis thaliana
AT5G06690 1.0kb downstream 1.0kb downstream 2456 true Chr5: 2059501-2061956 Arabidopsis thaliana
AT5G06690 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2059501-2060500 Arabidopsis thaliana
AT5G06690 2.0kb upstream 2.0kb upstream 3456 true Chr5: 2060501-2063956 Arabidopsis thaliana
AT5G06690 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2061957-2063956 Arabidopsis thaliana
AT5G06690 2.0kb downstream 2.0kb downstream 3456 true Chr5: 2058501-2061956 Arabidopsis thaliana
AT5G06690 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2058501-2060500 Arabidopsis thaliana
AT5G06690 5.0kb upstream 5.0kb upstream 6456 true Chr5: 2060501-2066956 Arabidopsis thaliana
AT5G06690 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2061957-2066956 Arabidopsis thaliana
AT5G06690 5.0kb downstream 5.0kb downstream 6456 true Chr5: 2055501-2061956 Arabidopsis thaliana
AT5G06690 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2055501-2060500 Arabidopsis thaliana
AT5G06690 10.0kb upstream 10.0kb upstream 11456 true Chr5: 2060501-2071956 Arabidopsis thaliana
AT5G06690 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2061957-2071956 Arabidopsis thaliana
AT5G06690 10.0kb downstream 10.0kb downstream 11456 true Chr5: 2050501-2061956 Arabidopsis thaliana
AT5G06690 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2050501-2060500 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331030 5261 Brassicaceae Singleton cluster - no MSA
123772242 5264 Brassicales-Malvales Singleton cluster - no MSA
124270762 5266 SBM Singleton cluster - no MSA
124247855 5268 Malvidae View MSA
124066341 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.621     High  
cufflinks 1.623        
cufflinks 36.793     High  
cufflinks 1.147        
cufflinks 38.789     High  
cufflinks 0.245     Low Low

0 Strain