Gene : AT5G06700 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  603
Name:  ? AT5G06700 Secondary Identifier:  ? PAC:19666644
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06700 0.5kb upstream 0.5kb upstream 3053 true Chr5: 2062987-2066039 Arabidopsis thaliana
AT5G06700 0.5kb upstream 0.5kb upstream 500 false Chr5: 2062987-2063486 Arabidopsis thaliana
AT5G06700 0.5kb downstream 0.5kb downstream 3053 true Chr5: 2063487-2066539 Arabidopsis thaliana
AT5G06700 0.5kb downstream 0.5kb downstream 500 false Chr5: 2066040-2066539 Arabidopsis thaliana
AT5G06700 1.0kb upstream 1.0kb upstream 3553 true Chr5: 2062487-2066039 Arabidopsis thaliana
AT5G06700 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2062487-2063486 Arabidopsis thaliana
AT5G06700 1.0kb downstream 1.0kb downstream 3553 true Chr5: 2063487-2067039 Arabidopsis thaliana
AT5G06700 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2066040-2067039 Arabidopsis thaliana
AT5G06700 2.0kb upstream 2.0kb upstream 4553 true Chr5: 2061487-2066039 Arabidopsis thaliana
AT5G06700 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2061487-2063486 Arabidopsis thaliana
AT5G06700 2.0kb downstream 2.0kb downstream 4553 true Chr5: 2063487-2068039 Arabidopsis thaliana
AT5G06700 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2066040-2068039 Arabidopsis thaliana
AT5G06700 5.0kb upstream 5.0kb upstream 7553 true Chr5: 2058487-2066039 Arabidopsis thaliana
AT5G06700 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2058487-2063486 Arabidopsis thaliana
AT5G06700 5.0kb downstream 5.0kb downstream 7553 true Chr5: 2063487-2071039 Arabidopsis thaliana
AT5G06700 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2066040-2071039 Arabidopsis thaliana
AT5G06700 10.0kb upstream 10.0kb upstream 12553 true Chr5: 2053487-2066039 Arabidopsis thaliana
AT5G06700 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2053487-2063486 Arabidopsis thaliana
AT5G06700 10.0kb downstream 10.0kb downstream 12553 true Chr5: 2063487-2076039 Arabidopsis thaliana
AT5G06700 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2066040-2076039 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370881 5261 Brassicaceae View MSA
123840007 5264 Brassicales-Malvales View MSA
124342313 5266 SBM View MSA
124238783 5268 Malvidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.617     High  
cufflinks 42.931     High High
cufflinks 34.565     High  
cufflinks 35.096     High  
cufflinks 36.86     High  
cufflinks 42.18     High High

0 Strain