Gene : UBA 2 A. thaliana TAIR10
Primary Identifier:  ? AT5G06460 Defline:  (1 of 2) K03178 - ubiquitin-activating enzyme E1 (UBE1, UBA1)
Genomic Order:  579 Name:  ? AT5G06460
Secondary Identifier:  ? PAC:19666537
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06460 0.5kb upstream 0.5kb upstream 4999 true Chr5: 1969529-1974527 Arabidopsis thaliana
AT5G06460 0.5kb upstream 0.5kb upstream 500 false Chr5: 1969529-1970028 Arabidopsis thaliana
AT5G06460 0.5kb downstream 0.5kb downstream 4999 true Chr5: 1970029-1975027 Arabidopsis thaliana
AT5G06460 0.5kb downstream 0.5kb downstream 500 false Chr5: 1974528-1975027 Arabidopsis thaliana
AT5G06460 1.0kb upstream 1.0kb upstream 5499 true Chr5: 1969029-1974527 Arabidopsis thaliana
AT5G06460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1969029-1970028 Arabidopsis thaliana
AT5G06460 1.0kb downstream 1.0kb downstream 5499 true Chr5: 1970029-1975527 Arabidopsis thaliana
AT5G06460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1974528-1975527 Arabidopsis thaliana
AT5G06460 2.0kb upstream 2.0kb upstream 6499 true Chr5: 1968029-1974527 Arabidopsis thaliana
AT5G06460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1968029-1970028 Arabidopsis thaliana
AT5G06460 2.0kb downstream 2.0kb downstream 6499 true Chr5: 1970029-1976527 Arabidopsis thaliana
AT5G06460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1974528-1976527 Arabidopsis thaliana
AT5G06460 5.0kb upstream 5.0kb upstream 9499 true Chr5: 1965029-1974527 Arabidopsis thaliana
AT5G06460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1965029-1970028 Arabidopsis thaliana
AT5G06460 5.0kb downstream 5.0kb downstream 9499 true Chr5: 1970029-1979527 Arabidopsis thaliana
AT5G06460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1974528-1979527 Arabidopsis thaliana
AT5G06460 10.0kb upstream 10.0kb upstream 14499 true Chr5: 1960029-1974527 Arabidopsis thaliana
AT5G06460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1960029-1970028 Arabidopsis thaliana
AT5G06460 10.0kb downstream 10.0kb downstream 14499 true Chr5: 1970029-1984527 Arabidopsis thaliana
AT5G06460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1974528-1984527 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370018 5261 Brassicaceae View MSA
123836628 5264 Brassicales-Malvales View MSA
124338208 5266 SBM View MSA
124246632 5268 Malvidae View MSA
124072689 5270 Rosid View MSA
123745856 5271 Pentapetalae View MSA
122789402 5272 Eudicot View MSA
122047936 5273 Angiosperm View MSA
121345745 5274 Embryophyte View MSA
123427546 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.907        
cufflinks 14.813        
cufflinks 8.999        
cufflinks 16.551       High
cufflinks 9.563        
cufflinks 16.618       High

0 Strain