Gene : AT5G06490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14155//PTHR14155:SF90 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  582
Name:  ? AT5G06490 Secondary Identifier:  ? PAC:19672873
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06490 0.5kb upstream 0.5kb upstream 1094 true Chr5: 1977996-1979089 Arabidopsis thaliana
AT5G06490 0.5kb upstream 0.5kb upstream 500 false Chr5: 1978590-1979089 Arabidopsis thaliana
AT5G06490 0.5kb downstream 0.5kb downstream 1094 true Chr5: 1977496-1978589 Arabidopsis thaliana
AT5G06490 0.5kb downstream 0.5kb downstream 500 false Chr5: 1977496-1977995 Arabidopsis thaliana
AT5G06490 1.0kb upstream 1.0kb upstream 1594 true Chr5: 1977996-1979589 Arabidopsis thaliana
AT5G06490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1978590-1979589 Arabidopsis thaliana
AT5G06490 1.0kb downstream 1.0kb downstream 1594 true Chr5: 1976996-1978589 Arabidopsis thaliana
AT5G06490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1976996-1977995 Arabidopsis thaliana
AT5G06490 2.0kb upstream 2.0kb upstream 2594 true Chr5: 1977996-1980589 Arabidopsis thaliana
AT5G06490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1978590-1980589 Arabidopsis thaliana
AT5G06490 2.0kb downstream 2.0kb downstream 2594 true Chr5: 1975996-1978589 Arabidopsis thaliana
AT5G06490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1975996-1977995 Arabidopsis thaliana
AT5G06490 5.0kb upstream 5.0kb upstream 5594 true Chr5: 1977996-1983589 Arabidopsis thaliana
AT5G06490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1978590-1983589 Arabidopsis thaliana
AT5G06490 5.0kb downstream 5.0kb downstream 5594 true Chr5: 1972996-1978589 Arabidopsis thaliana
AT5G06490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1972996-1977995 Arabidopsis thaliana
AT5G06490 10.0kb upstream 10.0kb upstream 10594 true Chr5: 1977996-1988589 Arabidopsis thaliana
AT5G06490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1978590-1988589 Arabidopsis thaliana
AT5G06490 10.0kb downstream 10.0kb downstream 10594 true Chr5: 1967996-1978589 Arabidopsis thaliana
AT5G06490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1967996-1977995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364196 5261 Brassicaceae View MSA
123837619 5264 Brassicales-Malvales View MSA
124339404 5266 SBM View MSA
124250731 5268 Malvidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  

0 Strain