Gene : AT5G06350 A. thaliana TAIR10
Defline:  (1 of 1) K14827 - pre-rRNA-processing protein IPI1 (IPI1, TEX10) Genomic Order:  568
Name:  ? AT5G06350 Secondary Identifier:  ? PAC:19671170
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06350 0.5kb upstream 0.5kb upstream 6077 true Chr5: 1938281-1944357 Arabidopsis thaliana
AT5G06350 0.5kb upstream 0.5kb upstream 500 false Chr5: 1938281-1938780 Arabidopsis thaliana
AT5G06350 0.5kb downstream 0.5kb downstream 6077 true Chr5: 1938781-1944857 Arabidopsis thaliana
AT5G06350 0.5kb downstream 0.5kb downstream 500 false Chr5: 1944358-1944857 Arabidopsis thaliana
AT5G06350 1.0kb upstream 1.0kb upstream 6577 true Chr5: 1937781-1944357 Arabidopsis thaliana
AT5G06350 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1937781-1938780 Arabidopsis thaliana
AT5G06350 1.0kb downstream 1.0kb downstream 6577 true Chr5: 1938781-1945357 Arabidopsis thaliana
AT5G06350 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1944358-1945357 Arabidopsis thaliana
AT5G06350 2.0kb upstream 2.0kb upstream 7577 true Chr5: 1936781-1944357 Arabidopsis thaliana
AT5G06350 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1936781-1938780 Arabidopsis thaliana
AT5G06350 2.0kb downstream 2.0kb downstream 7577 true Chr5: 1938781-1946357 Arabidopsis thaliana
AT5G06350 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1944358-1946357 Arabidopsis thaliana
AT5G06350 5.0kb upstream 5.0kb upstream 10577 true Chr5: 1933781-1944357 Arabidopsis thaliana
AT5G06350 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1933781-1938780 Arabidopsis thaliana
AT5G06350 5.0kb downstream 5.0kb downstream 10577 true Chr5: 1938781-1949357 Arabidopsis thaliana
AT5G06350 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1944358-1949357 Arabidopsis thaliana
AT5G06350 10.0kb upstream 10.0kb upstream 15577 true Chr5: 1928781-1944357 Arabidopsis thaliana
AT5G06350 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1928781-1938780 Arabidopsis thaliana
AT5G06350 10.0kb downstream 10.0kb downstream 15577 true Chr5: 1938781-1954357 Arabidopsis thaliana
AT5G06350 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1944358-1954357 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
122372867 5261 Brassicaceae View MSA
123830956 5264 Brassicales-Malvales View MSA
124346266 5266 SBM View MSA
124245108 5268 Malvidae View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.35        
cufflinks 5.334        
cufflinks 3.508        
cufflinks 5.832       High
cufflinks 2.946       Low
cufflinks 5.301        

0 Strain