Gene : TBL9 A. thaliana TAIR10
Primary Identifier:  ? AT5G06230 Defline:  (1 of 2) PTHR32285:SF53 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 8-RELATED
Genomic Order:  555 Name:  ? AT5G06230
Secondary Identifier:  ? PAC:19666152
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06230 0.5kb upstream 0.5kb upstream 2694 true Chr5: 1884928-1887621 Arabidopsis thaliana
AT5G06230 0.5kb upstream 0.5kb upstream 500 false Chr5: 1887122-1887621 Arabidopsis thaliana
AT5G06230 0.5kb downstream 0.5kb downstream 2694 true Chr5: 1884428-1887121 Arabidopsis thaliana
AT5G06230 0.5kb downstream 0.5kb downstream 500 false Chr5: 1884428-1884927 Arabidopsis thaliana
AT5G06230 1.0kb upstream 1.0kb upstream 3194 true Chr5: 1884928-1888121 Arabidopsis thaliana
AT5G06230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1887122-1888121 Arabidopsis thaliana
AT5G06230 1.0kb downstream 1.0kb downstream 3194 true Chr5: 1883928-1887121 Arabidopsis thaliana
AT5G06230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1883928-1884927 Arabidopsis thaliana
AT5G06230 2.0kb upstream 2.0kb upstream 4194 true Chr5: 1884928-1889121 Arabidopsis thaliana
AT5G06230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1887122-1889121 Arabidopsis thaliana
AT5G06230 2.0kb downstream 2.0kb downstream 4194 true Chr5: 1882928-1887121 Arabidopsis thaliana
AT5G06230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1882928-1884927 Arabidopsis thaliana
AT5G06230 5.0kb upstream 5.0kb upstream 7194 true Chr5: 1884928-1892121 Arabidopsis thaliana
AT5G06230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1887122-1892121 Arabidopsis thaliana
AT5G06230 5.0kb downstream 5.0kb downstream 7194 true Chr5: 1879928-1887121 Arabidopsis thaliana
AT5G06230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1879928-1884927 Arabidopsis thaliana
AT5G06230 10.0kb upstream 10.0kb upstream 12194 true Chr5: 1884928-1897121 Arabidopsis thaliana
AT5G06230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1887122-1897121 Arabidopsis thaliana
AT5G06230 10.0kb downstream 10.0kb downstream 12194 true Chr5: 1874928-1887121 Arabidopsis thaliana
AT5G06230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1874928-1884927 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373720 5261 Brassicaceae View MSA
123839977 5264 Brassicales-Malvales View MSA
124336444 5266 SBM View MSA
124237220 5268 Malvidae View MSA
124060600 5270 Rosid View MSA
123745624 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.9        
cufflinks 1.564        
cufflinks 0.374       Low
cufflinks 2.036       High
cufflinks 0.713        
cufflinks 1.459        

0 Strain