Gene : emb2735 A. thaliana TAIR10
Primary Identifier:  ? AT5G06240 Defline:  embryo defective 2735
Genomic Order:  556 Name:  ? AT5G06240
Secondary Identifier:  ? PAC:19666419
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06240 0.5kb upstream 0.5kb upstream 1888 true Chr5: 1887811-1889698 Arabidopsis thaliana
AT5G06240 0.5kb upstream 0.5kb upstream 500 false Chr5: 1887811-1888310 Arabidopsis thaliana
AT5G06240 0.5kb downstream 0.5kb downstream 1888 true Chr5: 1888311-1890198 Arabidopsis thaliana
AT5G06240 0.5kb downstream 0.5kb downstream 500 false Chr5: 1889699-1890198 Arabidopsis thaliana
AT5G06240 1.0kb upstream 1.0kb upstream 2388 true Chr5: 1887311-1889698 Arabidopsis thaliana
AT5G06240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1887311-1888310 Arabidopsis thaliana
AT5G06240 1.0kb downstream 1.0kb downstream 2388 true Chr5: 1888311-1890698 Arabidopsis thaliana
AT5G06240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1889699-1890698 Arabidopsis thaliana
AT5G06240 2.0kb upstream 2.0kb upstream 3388 true Chr5: 1886311-1889698 Arabidopsis thaliana
AT5G06240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1886311-1888310 Arabidopsis thaliana
AT5G06240 2.0kb downstream 2.0kb downstream 3388 true Chr5: 1888311-1891698 Arabidopsis thaliana
AT5G06240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1889699-1891698 Arabidopsis thaliana
AT5G06240 5.0kb upstream 5.0kb upstream 6388 true Chr5: 1883311-1889698 Arabidopsis thaliana
AT5G06240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1883311-1888310 Arabidopsis thaliana
AT5G06240 5.0kb downstream 5.0kb downstream 6388 true Chr5: 1888311-1894698 Arabidopsis thaliana
AT5G06240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1889699-1894698 Arabidopsis thaliana
AT5G06240 10.0kb upstream 10.0kb upstream 11388 true Chr5: 1878311-1889698 Arabidopsis thaliana
AT5G06240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1878311-1888310 Arabidopsis thaliana
AT5G06240 10.0kb downstream 10.0kb downstream 11388 true Chr5: 1888311-1899698 Arabidopsis thaliana
AT5G06240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1889699-1899698 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370928 5261 Brassicaceae View MSA
123828642 5264 Brassicales-Malvales View MSA
124345103 5266 SBM View MSA
124239910 5268 Malvidae View MSA
124065432 5270 Rosid View MSA
123747574 5271 Pentapetalae View MSA
122789622 5272 Eudicot View MSA
122046156 5273 Angiosperm View MSA
121344204 5274 Embryophyte View MSA
123425750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.897        
cufflinks 7.588        
cufflinks 6.96        
cufflinks 7.806        
cufflinks 8.312       High
cufflinks 6.401       Low

0 Strain