Gene : CYC1BAT A. thaliana TAIR10
Primary Identifier:  ? AT5G06150 Defline:  (1 of 4) PTHR10177:SF247 - CYCLIN G, ISOFORM A
Genomic Order:  547 Name:  ? AT5G06150
Secondary Identifier:  ? PAC:19671204
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06150 0.5kb upstream 0.5kb upstream 2871 true Chr5: 1859279-1862149 Arabidopsis thaliana
AT5G06150 0.5kb upstream 0.5kb upstream 500 false Chr5: 1861650-1862149 Arabidopsis thaliana
AT5G06150 0.5kb downstream 0.5kb downstream 2871 true Chr5: 1858779-1861649 Arabidopsis thaliana
AT5G06150 0.5kb downstream 0.5kb downstream 500 false Chr5: 1858779-1859278 Arabidopsis thaliana
AT5G06150 1.0kb upstream 1.0kb upstream 3371 true Chr5: 1859279-1862649 Arabidopsis thaliana
AT5G06150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1861650-1862649 Arabidopsis thaliana
AT5G06150 1.0kb downstream 1.0kb downstream 3371 true Chr5: 1858279-1861649 Arabidopsis thaliana
AT5G06150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1858279-1859278 Arabidopsis thaliana
AT5G06150 2.0kb upstream 2.0kb upstream 4371 true Chr5: 1859279-1863649 Arabidopsis thaliana
AT5G06150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1861650-1863649 Arabidopsis thaliana
AT5G06150 2.0kb downstream 2.0kb downstream 4371 true Chr5: 1857279-1861649 Arabidopsis thaliana
AT5G06150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1857279-1859278 Arabidopsis thaliana
AT5G06150 5.0kb upstream 5.0kb upstream 7371 true Chr5: 1859279-1866649 Arabidopsis thaliana
AT5G06150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1861650-1866649 Arabidopsis thaliana
AT5G06150 5.0kb downstream 5.0kb downstream 7371 true Chr5: 1854279-1861649 Arabidopsis thaliana
AT5G06150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1854279-1859278 Arabidopsis thaliana
AT5G06150 10.0kb upstream 10.0kb upstream 12371 true Chr5: 1859279-1871649 Arabidopsis thaliana
AT5G06150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1861650-1871649 Arabidopsis thaliana
AT5G06150 10.0kb downstream 10.0kb downstream 12371 true Chr5: 1849279-1861649 Arabidopsis thaliana
AT5G06150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1849279-1859278 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373353 5261 Brassicaceae View MSA
123839941 5264 Brassicales-Malvales View MSA
124346570 5266 SBM View MSA
124252381 5268 Malvidae View MSA
124067906 5270 Rosid View MSA
123751880 5271 Pentapetalae View MSA
122796151 5272 Eudicot View MSA
122046684 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349995 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.1        
cufflinks 10.575        
cufflinks 3.301        
cufflinks 10.72        
cufflinks 2.097       Low
cufflinks 17.201       High

0 Strain