Gene : MYB33 A. thaliana TAIR10
Primary Identifier:  ? AT5G06100 Defline:  (1 of 2) PTHR10641:SF475 - MYB TRANSCRIPTION FACTOR-RELATED
Genomic Order:  542 Name:  ? AT5G06100
Secondary Identifier:  ? PAC:19670644
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06100 0.5kb upstream 0.5kb upstream 3321 true Chr5: 1837407-1840727 Arabidopsis thaliana
AT5G06100 0.5kb upstream 0.5kb upstream 500 false Chr5: 1837407-1837906 Arabidopsis thaliana
AT5G06100 0.5kb downstream 0.5kb downstream 3321 true Chr5: 1837907-1841227 Arabidopsis thaliana
AT5G06100 0.5kb downstream 0.5kb downstream 500 false Chr5: 1840728-1841227 Arabidopsis thaliana
AT5G06100 1.0kb upstream 1.0kb upstream 3821 true Chr5: 1836907-1840727 Arabidopsis thaliana
AT5G06100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1836907-1837906 Arabidopsis thaliana
AT5G06100 1.0kb downstream 1.0kb downstream 3821 true Chr5: 1837907-1841727 Arabidopsis thaliana
AT5G06100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1840728-1841727 Arabidopsis thaliana
AT5G06100 2.0kb upstream 2.0kb upstream 4821 true Chr5: 1835907-1840727 Arabidopsis thaliana
AT5G06100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1835907-1837906 Arabidopsis thaliana
AT5G06100 2.0kb downstream 2.0kb downstream 4821 true Chr5: 1837907-1842727 Arabidopsis thaliana
AT5G06100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1840728-1842727 Arabidopsis thaliana
AT5G06100 5.0kb upstream 5.0kb upstream 7821 true Chr5: 1832907-1840727 Arabidopsis thaliana
AT5G06100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1832907-1837906 Arabidopsis thaliana
AT5G06100 5.0kb downstream 5.0kb downstream 7821 true Chr5: 1837907-1845727 Arabidopsis thaliana
AT5G06100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1840728-1845727 Arabidopsis thaliana
AT5G06100 10.0kb upstream 10.0kb upstream 12821 true Chr5: 1827907-1840727 Arabidopsis thaliana
AT5G06100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1827907-1837906 Arabidopsis thaliana
AT5G06100 10.0kb downstream 10.0kb downstream 12821 true Chr5: 1837907-1850727 Arabidopsis thaliana
AT5G06100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1840728-1850727 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375432 5261 Brassicaceae View MSA
123836271 5264 Brassicales-Malvales View MSA
124342756 5266 SBM View MSA
124244444 5268 Malvidae View MSA
124068155 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.281        
cufflinks 2.873        
cufflinks 2.434        
cufflinks 3.287       High
cufflinks 2.315        
cufflinks 2.287        

0 Strain