Gene : LBD33 A. thaliana TAIR10
Primary Identifier:  ? AT5G06080 Defline:  (1 of 1) PTHR31529:SF6 - LOB DOMAIN-CONTAINING PROTEIN 33
Genomic Order:  540 Name:  ? AT5G06080
Secondary Identifier:  ? PAC:19668285
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06080 0.5kb upstream 0.5kb upstream 1172 true Chr5: 1830796-1831967 Arabidopsis thaliana
AT5G06080 0.5kb upstream 0.5kb upstream 500 false Chr5: 1831468-1831967 Arabidopsis thaliana
AT5G06080 0.5kb downstream 0.5kb downstream 1172 true Chr5: 1830296-1831467 Arabidopsis thaliana
AT5G06080 0.5kb downstream 0.5kb downstream 500 false Chr5: 1830296-1830795 Arabidopsis thaliana
AT5G06080 1.0kb upstream 1.0kb upstream 1672 true Chr5: 1830796-1832467 Arabidopsis thaliana
AT5G06080 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1831468-1832467 Arabidopsis thaliana
AT5G06080 1.0kb downstream 1.0kb downstream 1672 true Chr5: 1829796-1831467 Arabidopsis thaliana
AT5G06080 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1829796-1830795 Arabidopsis thaliana
AT5G06080 2.0kb upstream 2.0kb upstream 2672 true Chr5: 1830796-1833467 Arabidopsis thaliana
AT5G06080 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1831468-1833467 Arabidopsis thaliana
AT5G06080 2.0kb downstream 2.0kb downstream 2672 true Chr5: 1828796-1831467 Arabidopsis thaliana
AT5G06080 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1828796-1830795 Arabidopsis thaliana
AT5G06080 5.0kb upstream 5.0kb upstream 5672 true Chr5: 1830796-1836467 Arabidopsis thaliana
AT5G06080 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1831468-1836467 Arabidopsis thaliana
AT5G06080 5.0kb downstream 5.0kb downstream 5672 true Chr5: 1825796-1831467 Arabidopsis thaliana
AT5G06080 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1825796-1830795 Arabidopsis thaliana
AT5G06080 10.0kb upstream 10.0kb upstream 10672 true Chr5: 1830796-1841467 Arabidopsis thaliana
AT5G06080 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1831468-1841467 Arabidopsis thaliana
AT5G06080 10.0kb downstream 10.0kb downstream 10672 true Chr5: 1820796-1831467 Arabidopsis thaliana
AT5G06080 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1820796-1830795 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361931 5261 Brassicaceae View MSA
123835536 5264 Brassicales-Malvales View MSA
124347286 5266 SBM View MSA
124244721 5268 Malvidae View MSA
124067335 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.181     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.241     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low Low

0 Strain