Gene : DHS A. thaliana TAIR10
Primary Identifier:  ? AT5G05920 Defline:  (1 of 1) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase
Genomic Order:  521 Name:  ? AT5G05920
Secondary Identifier:  ? PAC:19670954
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5905 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05920 0.5kb upstream 0.5kb upstream 2780 true Chr5: 1777547-1780326 Arabidopsis thaliana
AT5G05920 0.5kb upstream 0.5kb upstream 500 false Chr5: 1779827-1780326 Arabidopsis thaliana
AT5G05920 0.5kb downstream 0.5kb downstream 2780 true Chr5: 1777047-1779826 Arabidopsis thaliana
AT5G05920 0.5kb downstream 0.5kb downstream 500 false Chr5: 1777047-1777546 Arabidopsis thaliana
AT5G05920 1.0kb upstream 1.0kb upstream 3280 true Chr5: 1777547-1780826 Arabidopsis thaliana
AT5G05920 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1779827-1780826 Arabidopsis thaliana
AT5G05920 1.0kb downstream 1.0kb downstream 3280 true Chr5: 1776547-1779826 Arabidopsis thaliana
AT5G05920 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1776547-1777546 Arabidopsis thaliana
AT5G05920 2.0kb upstream 2.0kb upstream 4280 true Chr5: 1777547-1781826 Arabidopsis thaliana
AT5G05920 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1779827-1781826 Arabidopsis thaliana
AT5G05920 2.0kb downstream 2.0kb downstream 4280 true Chr5: 1775547-1779826 Arabidopsis thaliana
AT5G05920 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1775547-1777546 Arabidopsis thaliana
AT5G05920 5.0kb upstream 5.0kb upstream 7280 true Chr5: 1777547-1784826 Arabidopsis thaliana
AT5G05920 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1779827-1784826 Arabidopsis thaliana
AT5G05920 5.0kb downstream 5.0kb downstream 7280 true Chr5: 1772547-1779826 Arabidopsis thaliana
AT5G05920 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1772547-1777546 Arabidopsis thaliana
AT5G05920 10.0kb upstream 10.0kb upstream 12280 true Chr5: 1777547-1789826 Arabidopsis thaliana
AT5G05920 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1779827-1789826 Arabidopsis thaliana
AT5G05920 10.0kb downstream 10.0kb downstream 12280 true Chr5: 1767547-1779826 Arabidopsis thaliana
AT5G05920 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1767547-1777546 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363410 5261 Brassicaceae View MSA
123829955 5264 Brassicales-Malvales View MSA
124340739 5266 SBM View MSA
124241144 5268 Malvidae View MSA
124061456 5270 Rosid View MSA
123736781 5271 Pentapetalae View MSA
122791984 5272 Eudicot View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.447        
cufflinks 3.564       High
cufflinks 2.424        
cufflinks 3.215        
cufflinks 2.157       Low
cufflinks 3.584       High

0 Strain