Gene : EGY2 A. thaliana TAIR10
Primary Identifier:  ? AT5G05740 Defline:  (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED
Genomic Order:  503 Name:  ? AT5G05740
Secondary Identifier:  ? PAC:19672795
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05740 0.5kb upstream 0.5kb upstream 3695 true Chr5: 1723836-1727530 Arabidopsis thaliana
AT5G05740 0.5kb upstream 0.5kb upstream 500 false Chr5: 1727031-1727530 Arabidopsis thaliana
AT5G05740 0.5kb downstream 0.5kb downstream 3695 true Chr5: 1723336-1727030 Arabidopsis thaliana
AT5G05740 0.5kb downstream 0.5kb downstream 500 false Chr5: 1723336-1723835 Arabidopsis thaliana
AT5G05740 1.0kb upstream 1.0kb upstream 4195 true Chr5: 1723836-1728030 Arabidopsis thaliana
AT5G05740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1727031-1728030 Arabidopsis thaliana
AT5G05740 1.0kb downstream 1.0kb downstream 4195 true Chr5: 1722836-1727030 Arabidopsis thaliana
AT5G05740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1722836-1723835 Arabidopsis thaliana
AT5G05740 2.0kb upstream 2.0kb upstream 5195 true Chr5: 1723836-1729030 Arabidopsis thaliana
AT5G05740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1727031-1729030 Arabidopsis thaliana
AT5G05740 2.0kb downstream 2.0kb downstream 5195 true Chr5: 1721836-1727030 Arabidopsis thaliana
AT5G05740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1721836-1723835 Arabidopsis thaliana
AT5G05740 5.0kb upstream 5.0kb upstream 8195 true Chr5: 1723836-1732030 Arabidopsis thaliana
AT5G05740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1727031-1732030 Arabidopsis thaliana
AT5G05740 5.0kb downstream 5.0kb downstream 8195 true Chr5: 1718836-1727030 Arabidopsis thaliana
AT5G05740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1718836-1723835 Arabidopsis thaliana
AT5G05740 10.0kb upstream 10.0kb upstream 13195 true Chr5: 1723836-1737030 Arabidopsis thaliana
AT5G05740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1727031-1737030 Arabidopsis thaliana
AT5G05740 10.0kb downstream 10.0kb downstream 13195 true Chr5: 1713836-1727030 Arabidopsis thaliana
AT5G05740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1713836-1723835 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373446 5261 Brassicaceae View MSA
123834599 5264 Brassicales-Malvales View MSA
124341075 5266 SBM View MSA
124242686 5268 Malvidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.806        
cufflinks 0.615        
cufflinks 12.31       High
cufflinks 0.579        
cufflinks 8.904        
cufflinks 0.465       Low

0 Strain