Gene : SYP31 A. thaliana TAIR10
Primary Identifier:  ? AT5G05760 Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31
Genomic Order:  505 Name:  ? AT5G05760
Secondary Identifier:  ? PAC:19672648
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05760 0.5kb upstream 0.5kb upstream 2629 true Chr5: 1728893-1731521 Arabidopsis thaliana
AT5G05760 0.5kb upstream 0.5kb upstream 500 false Chr5: 1731022-1731521 Arabidopsis thaliana
AT5G05760 0.5kb downstream 0.5kb downstream 2629 true Chr5: 1728393-1731021 Arabidopsis thaliana
AT5G05760 0.5kb downstream 0.5kb downstream 500 false Chr5: 1728393-1728892 Arabidopsis thaliana
AT5G05760 1.0kb upstream 1.0kb upstream 3129 true Chr5: 1728893-1732021 Arabidopsis thaliana
AT5G05760 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1731022-1732021 Arabidopsis thaliana
AT5G05760 1.0kb downstream 1.0kb downstream 3129 true Chr5: 1727893-1731021 Arabidopsis thaliana
AT5G05760 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1727893-1728892 Arabidopsis thaliana
AT5G05760 2.0kb upstream 2.0kb upstream 4129 true Chr5: 1728893-1733021 Arabidopsis thaliana
AT5G05760 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1731022-1733021 Arabidopsis thaliana
AT5G05760 2.0kb downstream 2.0kb downstream 4129 true Chr5: 1726893-1731021 Arabidopsis thaliana
AT5G05760 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1726893-1728892 Arabidopsis thaliana
AT5G05760 5.0kb upstream 5.0kb upstream 7129 true Chr5: 1728893-1736021 Arabidopsis thaliana
AT5G05760 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1731022-1736021 Arabidopsis thaliana
AT5G05760 5.0kb downstream 5.0kb downstream 7129 true Chr5: 1723893-1731021 Arabidopsis thaliana
AT5G05760 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1723893-1728892 Arabidopsis thaliana
AT5G05760 10.0kb upstream 10.0kb upstream 12129 true Chr5: 1728893-1741021 Arabidopsis thaliana
AT5G05760 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1731022-1741021 Arabidopsis thaliana
AT5G05760 10.0kb downstream 10.0kb downstream 12129 true Chr5: 1718893-1731021 Arabidopsis thaliana
AT5G05760 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1718893-1728892 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373540 5261 Brassicaceae View MSA
123832817 5264 Brassicales-Malvales View MSA
124345635 5266 SBM View MSA
124237514 5268 Malvidae View MSA
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.407       Low
cufflinks 7.936        
cufflinks 4.334       Low
cufflinks 9.214       High
cufflinks 5.397        
cufflinks 6.902        

0 Strain