Gene : AT5G05790 A. thaliana TAIR10
Defline:  (1 of 8) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  508
Name:  ? AT5G05790 Secondary Identifier:  ? PAC:19666354
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05790 0.5kb upstream 0.5kb upstream 1957 true Chr5: 1740572-1742528 Arabidopsis thaliana
AT5G05790 0.5kb upstream 0.5kb upstream 500 false Chr5: 1742029-1742528 Arabidopsis thaliana
AT5G05790 0.5kb downstream 0.5kb downstream 1957 true Chr5: 1740072-1742028 Arabidopsis thaliana
AT5G05790 0.5kb downstream 0.5kb downstream 500 false Chr5: 1740072-1740571 Arabidopsis thaliana
AT5G05790 1.0kb upstream 1.0kb upstream 2457 true Chr5: 1740572-1743028 Arabidopsis thaliana
AT5G05790 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1742029-1743028 Arabidopsis thaliana
AT5G05790 1.0kb downstream 1.0kb downstream 2457 true Chr5: 1739572-1742028 Arabidopsis thaliana
AT5G05790 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1739572-1740571 Arabidopsis thaliana
AT5G05790 2.0kb upstream 2.0kb upstream 3457 true Chr5: 1740572-1744028 Arabidopsis thaliana
AT5G05790 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1742029-1744028 Arabidopsis thaliana
AT5G05790 2.0kb downstream 2.0kb downstream 3457 true Chr5: 1738572-1742028 Arabidopsis thaliana
AT5G05790 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1738572-1740571 Arabidopsis thaliana
AT5G05790 5.0kb upstream 5.0kb upstream 6457 true Chr5: 1740572-1747028 Arabidopsis thaliana
AT5G05790 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1742029-1747028 Arabidopsis thaliana
AT5G05790 5.0kb downstream 5.0kb downstream 6457 true Chr5: 1735572-1742028 Arabidopsis thaliana
AT5G05790 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1735572-1740571 Arabidopsis thaliana
AT5G05790 10.0kb upstream 10.0kb upstream 11457 true Chr5: 1740572-1752028 Arabidopsis thaliana
AT5G05790 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1742029-1752028 Arabidopsis thaliana
AT5G05790 10.0kb downstream 10.0kb downstream 11457 true Chr5: 1730572-1742028 Arabidopsis thaliana
AT5G05790 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1730572-1740571 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122362664 5261 Brassicaceae View MSA
123833684 5264 Brassicales-Malvales View MSA
124347714 5266 SBM View MSA
124245031 5268 Malvidae View MSA
124064393 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.699        
cufflinks 33.255     High  
cufflinks 2.343        
cufflinks 37.799     High High
cufflinks 1.807       Low
cufflinks 20.178        

0 Strain