Gene : ASA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G05730 Defline:  (1 of 3) K01657 - anthranilate synthase component I (trpE)
Genomic Order:  502 Name:  ? AT5G05730
Secondary Identifier:  ? PAC:19669408
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRPSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05730 0.5kb upstream 0.5kb upstream 3854 true Chr5: 1719557-1723410 Arabidopsis thaliana
AT5G05730 0.5kb upstream 0.5kb upstream 500 false Chr5: 1722911-1723410 Arabidopsis thaliana
AT5G05730 0.5kb downstream 0.5kb downstream 3854 true Chr5: 1719057-1722910 Arabidopsis thaliana
AT5G05730 0.5kb downstream 0.5kb downstream 500 false Chr5: 1719057-1719556 Arabidopsis thaliana
AT5G05730 1.0kb upstream 1.0kb upstream 4354 true Chr5: 1719557-1723910 Arabidopsis thaliana
AT5G05730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1722911-1723910 Arabidopsis thaliana
AT5G05730 1.0kb downstream 1.0kb downstream 4354 true Chr5: 1718557-1722910 Arabidopsis thaliana
AT5G05730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1718557-1719556 Arabidopsis thaliana
AT5G05730 2.0kb upstream 2.0kb upstream 5354 true Chr5: 1719557-1724910 Arabidopsis thaliana
AT5G05730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1722911-1724910 Arabidopsis thaliana
AT5G05730 2.0kb downstream 2.0kb downstream 5354 true Chr5: 1717557-1722910 Arabidopsis thaliana
AT5G05730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1717557-1719556 Arabidopsis thaliana
AT5G05730 5.0kb upstream 5.0kb upstream 8354 true Chr5: 1719557-1727910 Arabidopsis thaliana
AT5G05730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1722911-1727910 Arabidopsis thaliana
AT5G05730 5.0kb downstream 5.0kb downstream 8354 true Chr5: 1714557-1722910 Arabidopsis thaliana
AT5G05730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1714557-1719556 Arabidopsis thaliana
AT5G05730 10.0kb upstream 10.0kb upstream 13354 true Chr5: 1719557-1732910 Arabidopsis thaliana
AT5G05730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1722911-1732910 Arabidopsis thaliana
AT5G05730 10.0kb downstream 10.0kb downstream 13354 true Chr5: 1709557-1722910 Arabidopsis thaliana
AT5G05730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1709557-1719556 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365432 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.221       Low
cufflinks 28.063        
cufflinks 18.339        
cufflinks 29.807        
cufflinks 25.065        
cufflinks 30.513     High  

0 Strain