Gene : AT5G08600 A. thaliana TAIR10
Defline:  (1 of 2) K14567 - U3 small nucleolar RNA-associated protein 14 (UTP14) Genomic Order:  808
Name:  ? AT5G08600 Secondary Identifier:  ? PAC:19667241
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08600 0.5kb upstream 0.5kb upstream 4555 true Chr5: 2785687-2790241 Arabidopsis thaliana
AT5G08600 0.5kb upstream 0.5kb upstream 500 false Chr5: 2785687-2786186 Arabidopsis thaliana
AT5G08600 0.5kb downstream 0.5kb downstream 4555 true Chr5: 2786187-2790741 Arabidopsis thaliana
AT5G08600 0.5kb downstream 0.5kb downstream 500 false Chr5: 2790242-2790741 Arabidopsis thaliana
AT5G08600 1.0kb upstream 1.0kb upstream 5055 true Chr5: 2785187-2790241 Arabidopsis thaliana
AT5G08600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2785187-2786186 Arabidopsis thaliana
AT5G08600 1.0kb downstream 1.0kb downstream 5055 true Chr5: 2786187-2791241 Arabidopsis thaliana
AT5G08600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2790242-2791241 Arabidopsis thaliana
AT5G08600 2.0kb upstream 2.0kb upstream 6055 true Chr5: 2784187-2790241 Arabidopsis thaliana
AT5G08600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2784187-2786186 Arabidopsis thaliana
AT5G08600 2.0kb downstream 2.0kb downstream 6055 true Chr5: 2786187-2792241 Arabidopsis thaliana
AT5G08600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2790242-2792241 Arabidopsis thaliana
AT5G08600 5.0kb upstream 5.0kb upstream 9055 true Chr5: 2781187-2790241 Arabidopsis thaliana
AT5G08600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2781187-2786186 Arabidopsis thaliana
AT5G08600 5.0kb downstream 5.0kb downstream 9055 true Chr5: 2786187-2795241 Arabidopsis thaliana
AT5G08600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2790242-2795241 Arabidopsis thaliana
AT5G08600 10.0kb upstream 10.0kb upstream 14055 true Chr5: 2776187-2790241 Arabidopsis thaliana
AT5G08600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2776187-2786186 Arabidopsis thaliana
AT5G08600 10.0kb downstream 10.0kb downstream 14055 true Chr5: 2786187-2800241 Arabidopsis thaliana
AT5G08600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2790242-2800241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499830 5273 Angiosperm View MSA
122338733 5261 Brassicaceae View MSA
123779283 5264 Brassicales-Malvales View MSA
124277612 5266 SBM View MSA
124132799 5268 Malvidae View MSA
123861060 5270 Rosid View MSA
123446631 5271 Pentapetalae View MSA
122482178 5272 Eudicot View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.363        
cufflinks 0.18     Low  
cufflinks 0.732       High
cufflinks 0.258     Low  
cufflinks 0.628       High
cufflinks 0.159     Low Low

0 Strain