Gene : AT5G08630 A. thaliana TAIR10
Defline:  (1 of 1) PF10537 - ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) Genomic Order:  811
Name:  ? AT5G08630 Secondary Identifier:  ? PAC:19669897
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08630 0.5kb upstream 0.5kb upstream 5391 true Chr5: 2798281-2803671 Arabidopsis thaliana
AT5G08630 0.5kb upstream 0.5kb upstream 500 false Chr5: 2803172-2803671 Arabidopsis thaliana
AT5G08630 0.5kb downstream 0.5kb downstream 5391 true Chr5: 2797781-2803171 Arabidopsis thaliana
AT5G08630 0.5kb downstream 0.5kb downstream 500 false Chr5: 2797781-2798280 Arabidopsis thaliana
AT5G08630 1.0kb upstream 1.0kb upstream 5891 true Chr5: 2798281-2804171 Arabidopsis thaliana
AT5G08630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2803172-2804171 Arabidopsis thaliana
AT5G08630 1.0kb downstream 1.0kb downstream 5891 true Chr5: 2797281-2803171 Arabidopsis thaliana
AT5G08630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2797281-2798280 Arabidopsis thaliana
AT5G08630 2.0kb upstream 2.0kb upstream 6891 true Chr5: 2798281-2805171 Arabidopsis thaliana
AT5G08630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2803172-2805171 Arabidopsis thaliana
AT5G08630 2.0kb downstream 2.0kb downstream 6891 true Chr5: 2796281-2803171 Arabidopsis thaliana
AT5G08630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2796281-2798280 Arabidopsis thaliana
AT5G08630 5.0kb upstream 5.0kb upstream 9891 true Chr5: 2798281-2808171 Arabidopsis thaliana
AT5G08630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2803172-2808171 Arabidopsis thaliana
AT5G08630 5.0kb downstream 5.0kb downstream 9891 true Chr5: 2793281-2803171 Arabidopsis thaliana
AT5G08630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2793281-2798280 Arabidopsis thaliana
AT5G08630 10.0kb upstream 10.0kb upstream 14891 true Chr5: 2798281-2813171 Arabidopsis thaliana
AT5G08630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2803172-2813171 Arabidopsis thaliana
AT5G08630 10.0kb downstream 10.0kb downstream 14891 true Chr5: 2788281-2803171 Arabidopsis thaliana
AT5G08630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2788281-2798280 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379681 5261 Brassicaceae View MSA
123833393 5264 Brassicales-Malvales View MSA
124341894 5266 SBM View MSA
124238464 5268 Malvidae View MSA
124067702 5270 Rosid View MSA
123739620 5271 Pentapetalae View MSA
122786030 5272 Eudicot View MSA
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.657        
cufflinks 7.247        
cufflinks 4.083       Low
cufflinks 8.347       High
cufflinks 4.424       Low
cufflinks 7.125        

0 Strain