Gene : AT5G08660 A. thaliana TAIR10
Defline:  (1 of 6) PF05003//PF11961 - Protein of unknown function (DUF668) (DUF668) // Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  814
Name:  ? AT5G08660 Secondary Identifier:  ? PAC:19669449
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08660 0.5kb upstream 0.5kb upstream 4433 true Chr5: 2813587-2818019 Arabidopsis thaliana
AT5G08660 0.5kb upstream 0.5kb upstream 500 false Chr5: 2813587-2814086 Arabidopsis thaliana
AT5G08660 0.5kb downstream 0.5kb downstream 4433 true Chr5: 2814087-2818519 Arabidopsis thaliana
AT5G08660 0.5kb downstream 0.5kb downstream 500 false Chr5: 2818020-2818519 Arabidopsis thaliana
AT5G08660 1.0kb upstream 1.0kb upstream 4933 true Chr5: 2813087-2818019 Arabidopsis thaliana
AT5G08660 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2813087-2814086 Arabidopsis thaliana
AT5G08660 1.0kb downstream 1.0kb downstream 4933 true Chr5: 2814087-2819019 Arabidopsis thaliana
AT5G08660 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2818020-2819019 Arabidopsis thaliana
AT5G08660 2.0kb upstream 2.0kb upstream 5933 true Chr5: 2812087-2818019 Arabidopsis thaliana
AT5G08660 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2812087-2814086 Arabidopsis thaliana
AT5G08660 2.0kb downstream 2.0kb downstream 5933 true Chr5: 2814087-2820019 Arabidopsis thaliana
AT5G08660 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2818020-2820019 Arabidopsis thaliana
AT5G08660 5.0kb upstream 5.0kb upstream 8933 true Chr5: 2809087-2818019 Arabidopsis thaliana
AT5G08660 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2809087-2814086 Arabidopsis thaliana
AT5G08660 5.0kb downstream 5.0kb downstream 8933 true Chr5: 2814087-2823019 Arabidopsis thaliana
AT5G08660 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2818020-2823019 Arabidopsis thaliana
AT5G08660 10.0kb upstream 10.0kb upstream 13933 true Chr5: 2804087-2818019 Arabidopsis thaliana
AT5G08660 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2804087-2814086 Arabidopsis thaliana
AT5G08660 10.0kb downstream 10.0kb downstream 13933 true Chr5: 2814087-2828019 Arabidopsis thaliana
AT5G08660 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2818020-2828019 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691317 5273 Angiosperm View MSA
122370589 5261 Brassicaceae View MSA
123837395 5264 Brassicales-Malvales View MSA
124348001 5266 SBM View MSA
124180961 5268 Malvidae View MSA
124050917 5270 Rosid View MSA
123647177 5271 Pentapetalae View MSA
122681176 5272 Eudicot View MSA
120963176 5274 Embryophyte View MSA
123003532 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.807       High
cufflinks 10.369        
cufflinks 8.463        
cufflinks 11.474        
cufflinks 9.749        
cufflinks 9.477        

0 Strain