Gene : PEX1 A. thaliana TAIR10
Primary Identifier:  ? AT5G08470 Defline:  (1 of 1) K13338 - peroxin-1 (PEX1)
Genomic Order:  792 Name:  ? AT5G08470
Secondary Identifier:  ? PAC:19668633
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08470 0.5kb upstream 0.5kb upstream 7632 true Chr5: 2735425-2743056 Arabidopsis thaliana
AT5G08470 0.5kb upstream 0.5kb upstream 500 false Chr5: 2735425-2735924 Arabidopsis thaliana
AT5G08470 0.5kb downstream 0.5kb downstream 7632 true Chr5: 2735925-2743556 Arabidopsis thaliana
AT5G08470 0.5kb downstream 0.5kb downstream 500 false Chr5: 2743057-2743556 Arabidopsis thaliana
AT5G08470 1.0kb upstream 1.0kb upstream 8132 true Chr5: 2734925-2743056 Arabidopsis thaliana
AT5G08470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2734925-2735924 Arabidopsis thaliana
AT5G08470 1.0kb downstream 1.0kb downstream 8132 true Chr5: 2735925-2744056 Arabidopsis thaliana
AT5G08470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2743057-2744056 Arabidopsis thaliana
AT5G08470 2.0kb upstream 2.0kb upstream 9132 true Chr5: 2733925-2743056 Arabidopsis thaliana
AT5G08470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2733925-2735924 Arabidopsis thaliana
AT5G08470 2.0kb downstream 2.0kb downstream 9132 true Chr5: 2735925-2745056 Arabidopsis thaliana
AT5G08470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2743057-2745056 Arabidopsis thaliana
AT5G08470 5.0kb upstream 5.0kb upstream 12132 true Chr5: 2730925-2743056 Arabidopsis thaliana
AT5G08470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2730925-2735924 Arabidopsis thaliana
AT5G08470 5.0kb downstream 5.0kb downstream 12132 true Chr5: 2735925-2748056 Arabidopsis thaliana
AT5G08470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2743057-2748056 Arabidopsis thaliana
AT5G08470 10.0kb upstream 10.0kb upstream 17132 true Chr5: 2725925-2743056 Arabidopsis thaliana
AT5G08470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2725925-2735924 Arabidopsis thaliana
AT5G08470 10.0kb downstream 10.0kb downstream 17132 true Chr5: 2735925-2753056 Arabidopsis thaliana
AT5G08470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2743057-2753056 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371708 5261 Brassicaceae View MSA
123833607 5264 Brassicales-Malvales View MSA
124337155 5266 SBM View MSA
124240116 5268 Malvidae View MSA
124063528 5270 Rosid View MSA
123736572 5271 Pentapetalae View MSA
122789738 5272 Eudicot View MSA
122044173 5273 Angiosperm View MSA
121346110 5274 Embryophyte View MSA
123424996 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.05       High
cufflinks 4.89        
cufflinks 5.266        
cufflinks 5.013        
cufflinks 5.452        
cufflinks 4.036       Low

0 Strain