Gene : AT5G08535 A. thaliana TAIR10
Defline:  (1 of 13) PF01585 - G-patch domain (G-patch) Genomic Order:  800
Name:  ? AT5G08535 Secondary Identifier:  ? PAC:19669640
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08535 0.5kb upstream 0.5kb upstream 1908 true Chr5: 2761529-2763436 Arabidopsis thaliana
AT5G08535 0.5kb upstream 0.5kb upstream 500 false Chr5: 2761529-2762028 Arabidopsis thaliana
AT5G08535 0.5kb downstream 0.5kb downstream 1908 true Chr5: 2762029-2763936 Arabidopsis thaliana
AT5G08535 0.5kb downstream 0.5kb downstream 500 false Chr5: 2763437-2763936 Arabidopsis thaliana
AT5G08535 1.0kb upstream 1.0kb upstream 2408 true Chr5: 2761029-2763436 Arabidopsis thaliana
AT5G08535 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2761029-2762028 Arabidopsis thaliana
AT5G08535 1.0kb downstream 1.0kb downstream 2408 true Chr5: 2762029-2764436 Arabidopsis thaliana
AT5G08535 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2763437-2764436 Arabidopsis thaliana
AT5G08535 2.0kb upstream 2.0kb upstream 3408 true Chr5: 2760029-2763436 Arabidopsis thaliana
AT5G08535 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2760029-2762028 Arabidopsis thaliana
AT5G08535 2.0kb downstream 2.0kb downstream 3408 true Chr5: 2762029-2765436 Arabidopsis thaliana
AT5G08535 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2763437-2765436 Arabidopsis thaliana
AT5G08535 5.0kb upstream 5.0kb upstream 6408 true Chr5: 2757029-2763436 Arabidopsis thaliana
AT5G08535 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2757029-2762028 Arabidopsis thaliana
AT5G08535 5.0kb downstream 5.0kb downstream 6408 true Chr5: 2762029-2768436 Arabidopsis thaliana
AT5G08535 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2763437-2768436 Arabidopsis thaliana
AT5G08535 10.0kb upstream 10.0kb upstream 11408 true Chr5: 2752029-2763436 Arabidopsis thaliana
AT5G08535 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2752029-2762028 Arabidopsis thaliana
AT5G08535 10.0kb downstream 10.0kb downstream 11408 true Chr5: 2762029-2773436 Arabidopsis thaliana
AT5G08535 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2763437-2773436 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368932 5261 Brassicaceae View MSA
123835712 5264 Brassicales-Malvales View MSA
124345139 5266 SBM View MSA
124243633 5268 Malvidae View MSA
124065567 5270 Rosid View MSA
123743393 5271 Pentapetalae View MSA
122790143 5272 Eudicot View MSA
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.753        
cufflinks 3.498        
cufflinks 3.005       Low
cufflinks 3.727        
cufflinks 3.591        
cufflinks 3.347        

0 Strain