Gene : AGAL2 A. thaliana TAIR10
Primary Identifier:  ? AT5G08370 Defline:  (1 of 3) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA)
Genomic Order:  780 Name:  ? AT5G08370
Secondary Identifier:  ? PAC:19673162
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1301 Arabidopsis thaliana pathologic  
Athaliana PWY-6527 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08370 0.5kb upstream 0.5kb upstream 3172 true Chr5: 2690879-2694050 Arabidopsis thaliana
AT5G08370 0.5kb upstream 0.5kb upstream 500 false Chr5: 2693551-2694050 Arabidopsis thaliana
AT5G08370 0.5kb downstream 0.5kb downstream 3172 true Chr5: 2690379-2693550 Arabidopsis thaliana
AT5G08370 0.5kb downstream 0.5kb downstream 500 false Chr5: 2690379-2690878 Arabidopsis thaliana
AT5G08370 1.0kb upstream 1.0kb upstream 3672 true Chr5: 2690879-2694550 Arabidopsis thaliana
AT5G08370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2693551-2694550 Arabidopsis thaliana
AT5G08370 1.0kb downstream 1.0kb downstream 3672 true Chr5: 2689879-2693550 Arabidopsis thaliana
AT5G08370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2689879-2690878 Arabidopsis thaliana
AT5G08370 2.0kb upstream 2.0kb upstream 4672 true Chr5: 2690879-2695550 Arabidopsis thaliana
AT5G08370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2693551-2695550 Arabidopsis thaliana
AT5G08370 2.0kb downstream 2.0kb downstream 4672 true Chr5: 2688879-2693550 Arabidopsis thaliana
AT5G08370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2688879-2690878 Arabidopsis thaliana
AT5G08370 5.0kb upstream 5.0kb upstream 7672 true Chr5: 2690879-2698550 Arabidopsis thaliana
AT5G08370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2693551-2698550 Arabidopsis thaliana
AT5G08370 5.0kb downstream 5.0kb downstream 7672 true Chr5: 2685879-2693550 Arabidopsis thaliana
AT5G08370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2685879-2690878 Arabidopsis thaliana
AT5G08370 10.0kb upstream 10.0kb upstream 12672 true Chr5: 2690879-2703550 Arabidopsis thaliana
AT5G08370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2693551-2703550 Arabidopsis thaliana
AT5G08370 10.0kb downstream 10.0kb downstream 12672 true Chr5: 2680879-2693550 Arabidopsis thaliana
AT5G08370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2680879-2690878 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369228 5261 Brassicaceae View MSA
123840043 5264 Brassicales-Malvales View MSA
124322672 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.617        
cufflinks 6.301        
cufflinks 6.209        
cufflinks 7.019        
cufflinks 5.662       Low
cufflinks 7.783       High

0 Strain