Gene : AT5G08350 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31969//PTHR31969:SF1 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 4-RELATED Genomic Order:  778
Name:  ? AT5G08350 Secondary Identifier:  ? PAC:19666507
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08350 0.5kb upstream 0.5kb upstream 1507 true Chr5: 2686245-2687751 Arabidopsis thaliana
AT5G08350 0.5kb upstream 0.5kb upstream 500 false Chr5: 2687252-2687751 Arabidopsis thaliana
AT5G08350 0.5kb downstream 0.5kb downstream 1507 true Chr5: 2685745-2687251 Arabidopsis thaliana
AT5G08350 0.5kb downstream 0.5kb downstream 500 false Chr5: 2685745-2686244 Arabidopsis thaliana
AT5G08350 1.0kb upstream 1.0kb upstream 2007 true Chr5: 2686245-2688251 Arabidopsis thaliana
AT5G08350 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2687252-2688251 Arabidopsis thaliana
AT5G08350 1.0kb downstream 1.0kb downstream 2007 true Chr5: 2685245-2687251 Arabidopsis thaliana
AT5G08350 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2685245-2686244 Arabidopsis thaliana
AT5G08350 2.0kb upstream 2.0kb upstream 3007 true Chr5: 2686245-2689251 Arabidopsis thaliana
AT5G08350 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2687252-2689251 Arabidopsis thaliana
AT5G08350 2.0kb downstream 2.0kb downstream 3007 true Chr5: 2684245-2687251 Arabidopsis thaliana
AT5G08350 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2684245-2686244 Arabidopsis thaliana
AT5G08350 5.0kb upstream 5.0kb upstream 6007 true Chr5: 2686245-2692251 Arabidopsis thaliana
AT5G08350 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2687252-2692251 Arabidopsis thaliana
AT5G08350 5.0kb downstream 5.0kb downstream 6007 true Chr5: 2681245-2687251 Arabidopsis thaliana
AT5G08350 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2681245-2686244 Arabidopsis thaliana
AT5G08350 10.0kb upstream 10.0kb upstream 11007 true Chr5: 2686245-2697251 Arabidopsis thaliana
AT5G08350 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2687252-2697251 Arabidopsis thaliana
AT5G08350 10.0kb downstream 10.0kb downstream 11007 true Chr5: 2676245-2687251 Arabidopsis thaliana
AT5G08350 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2676245-2686244 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377716 5261 Brassicaceae View MSA
123835411 5264 Brassicales-Malvales View MSA
124350303 5266 SBM View MSA
124250212 5268 Malvidae View MSA
124071565 5270 Rosid View MSA
123752617 5271 Pentapetalae View MSA
122792535 5272 Eudicot View MSA
122050138 5273 Angiosperm View MSA
121311760 5274 Embryophyte View MSA
123349015 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.0       Low
cufflinks 8.188        
cufflinks 6.382        
cufflinks 14.795       High
cufflinks 7.7        
cufflinks 5.804        

0 Strain