Gene : scpl35 A. thaliana TAIR10
Primary Identifier:  ? AT5G08260 Defline:  (1 of 1) PTHR11802:SF15 - SERINE CARBOXYPEPTIDASE-LIKE 35
Genomic Order:  766 Name:  ? AT5G08260
Secondary Identifier:  ? PAC:19669992
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08260 0.5kb upstream 0.5kb upstream 4766 true Chr5: 2656651-2661416 Arabidopsis thaliana
AT5G08260 0.5kb upstream 0.5kb upstream 500 false Chr5: 2656651-2657150 Arabidopsis thaliana
AT5G08260 0.5kb downstream 0.5kb downstream 4766 true Chr5: 2657151-2661916 Arabidopsis thaliana
AT5G08260 0.5kb downstream 0.5kb downstream 500 false Chr5: 2661417-2661916 Arabidopsis thaliana
AT5G08260 1.0kb upstream 1.0kb upstream 5266 true Chr5: 2656151-2661416 Arabidopsis thaliana
AT5G08260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2656151-2657150 Arabidopsis thaliana
AT5G08260 1.0kb downstream 1.0kb downstream 5266 true Chr5: 2657151-2662416 Arabidopsis thaliana
AT5G08260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2661417-2662416 Arabidopsis thaliana
AT5G08260 2.0kb upstream 2.0kb upstream 6266 true Chr5: 2655151-2661416 Arabidopsis thaliana
AT5G08260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2655151-2657150 Arabidopsis thaliana
AT5G08260 2.0kb downstream 2.0kb downstream 6266 true Chr5: 2657151-2663416 Arabidopsis thaliana
AT5G08260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2661417-2663416 Arabidopsis thaliana
AT5G08260 5.0kb upstream 5.0kb upstream 9266 true Chr5: 2652151-2661416 Arabidopsis thaliana
AT5G08260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2652151-2657150 Arabidopsis thaliana
AT5G08260 5.0kb downstream 5.0kb downstream 9266 true Chr5: 2657151-2666416 Arabidopsis thaliana
AT5G08260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2661417-2666416 Arabidopsis thaliana
AT5G08260 10.0kb upstream 10.0kb upstream 14266 true Chr5: 2647151-2661416 Arabidopsis thaliana
AT5G08260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2647151-2657150 Arabidopsis thaliana
AT5G08260 10.0kb downstream 10.0kb downstream 14266 true Chr5: 2657151-2671416 Arabidopsis thaliana
AT5G08260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2661417-2671416 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369031 5261 Brassicaceae View MSA
123828747 5264 Brassicales-Malvales View MSA
124338274 5266 SBM View MSA
124239727 5268 Malvidae View MSA
124064246 5270 Rosid View MSA
123744526 5271 Pentapetalae View MSA
122797546 5272 Eudicot View MSA
122047990 5273 Angiosperm View MSA
121310825 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.495        
cufflinks 35.06     High  
cufflinks 24.496        
cufflinks 25.523        
cufflinks 27.517     High  
cufflinks 43.668     High High

0 Strain