Gene : HEMC A. thaliana TAIR10
Primary Identifier:  ? AT5G08280 Defline:  (1 of 1) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase
Genomic Order:  768 Name:  ? AT5G08280
Secondary Identifier:  ? PAC:19667830
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5188 Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08280 0.5kb upstream 0.5kb upstream 2794 true Chr5: 2663499-2666292 Arabidopsis thaliana
AT5G08280 0.5kb upstream 0.5kb upstream 500 false Chr5: 2665793-2666292 Arabidopsis thaliana
AT5G08280 0.5kb downstream 0.5kb downstream 2794 true Chr5: 2662999-2665792 Arabidopsis thaliana
AT5G08280 0.5kb downstream 0.5kb downstream 500 false Chr5: 2662999-2663498 Arabidopsis thaliana
AT5G08280 1.0kb upstream 1.0kb upstream 3294 true Chr5: 2663499-2666792 Arabidopsis thaliana
AT5G08280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2665793-2666792 Arabidopsis thaliana
AT5G08280 1.0kb downstream 1.0kb downstream 3294 true Chr5: 2662499-2665792 Arabidopsis thaliana
AT5G08280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2662499-2663498 Arabidopsis thaliana
AT5G08280 2.0kb upstream 2.0kb upstream 4294 true Chr5: 2663499-2667792 Arabidopsis thaliana
AT5G08280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2665793-2667792 Arabidopsis thaliana
AT5G08280 2.0kb downstream 2.0kb downstream 4294 true Chr5: 2661499-2665792 Arabidopsis thaliana
AT5G08280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2661499-2663498 Arabidopsis thaliana
AT5G08280 5.0kb upstream 5.0kb upstream 7294 true Chr5: 2663499-2670792 Arabidopsis thaliana
AT5G08280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2665793-2670792 Arabidopsis thaliana
AT5G08280 5.0kb downstream 5.0kb downstream 7294 true Chr5: 2658499-2665792 Arabidopsis thaliana
AT5G08280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2658499-2663498 Arabidopsis thaliana
AT5G08280 10.0kb upstream 10.0kb upstream 12294 true Chr5: 2663499-2675792 Arabidopsis thaliana
AT5G08280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2665793-2675792 Arabidopsis thaliana
AT5G08280 10.0kb downstream 10.0kb downstream 12294 true Chr5: 2653499-2665792 Arabidopsis thaliana
AT5G08280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2653499-2663498 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364293 5261 Brassicaceae View MSA
123830880 5264 Brassicales-Malvales View MSA
124350121 5266 SBM View MSA
124253286 5268 Malvidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 127.334     High  
cufflinks 11.998        
cufflinks 168.765     High High
cufflinks 13.115        
cufflinks 117.859     High  
cufflinks 14.099        

0 Strain