Gene : BIM1 A. thaliana TAIR10
Primary Identifier:  ? AT5G08130 Defline:  (1 of 1) PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1
Genomic Order:  752 Name:  ? AT5G08130
Secondary Identifier:  ? PAC:19671924
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08130 0.5kb upstream 0.5kb upstream 4551 true Chr5: 2606200-2610750 Arabidopsis thaliana
AT5G08130 0.5kb upstream 0.5kb upstream 500 false Chr5: 2610251-2610750 Arabidopsis thaliana
AT5G08130 0.5kb downstream 0.5kb downstream 4551 true Chr5: 2605700-2610250 Arabidopsis thaliana
AT5G08130 0.5kb downstream 0.5kb downstream 500 false Chr5: 2605700-2606199 Arabidopsis thaliana
AT5G08130 1.0kb upstream 1.0kb upstream 5051 true Chr5: 2606200-2611250 Arabidopsis thaliana
AT5G08130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2610251-2611250 Arabidopsis thaliana
AT5G08130 1.0kb downstream 1.0kb downstream 5051 true Chr5: 2605200-2610250 Arabidopsis thaliana
AT5G08130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2605200-2606199 Arabidopsis thaliana
AT5G08130 2.0kb upstream 2.0kb upstream 6051 true Chr5: 2606200-2612250 Arabidopsis thaliana
AT5G08130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2610251-2612250 Arabidopsis thaliana
AT5G08130 2.0kb downstream 2.0kb downstream 6051 true Chr5: 2604200-2610250 Arabidopsis thaliana
AT5G08130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2604200-2606199 Arabidopsis thaliana
AT5G08130 5.0kb upstream 5.0kb upstream 9051 true Chr5: 2606200-2615250 Arabidopsis thaliana
AT5G08130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2610251-2615250 Arabidopsis thaliana
AT5G08130 5.0kb downstream 5.0kb downstream 9051 true Chr5: 2601200-2610250 Arabidopsis thaliana
AT5G08130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2601200-2606199 Arabidopsis thaliana
AT5G08130 10.0kb upstream 10.0kb upstream 14051 true Chr5: 2606200-2620250 Arabidopsis thaliana
AT5G08130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2610251-2620250 Arabidopsis thaliana
AT5G08130 10.0kb downstream 10.0kb downstream 14051 true Chr5: 2596200-2610250 Arabidopsis thaliana
AT5G08130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2596200-2606199 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361740 5261 Brassicaceae View MSA
123833621 5264 Brassicales-Malvales View MSA
124321882 5266 SBM View MSA
124250491 5268 Malvidae View MSA
124066777 5270 Rosid View MSA
123738645 5271 Pentapetalae View MSA
122790983 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.598       Low
cufflinks 5.025        
cufflinks 3.051        
cufflinks 5.115        
cufflinks 2.543        
cufflinks 4.548        

0 Strain