Gene : SOB5 A. thaliana TAIR10
Primary Identifier:  ? AT5G08150 Defline:  suppressor of phytochrome b 5
Genomic Order:  755 Name:  ? AT5G08150
Secondary Identifier:  ? PAC:19667832
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08150 0.5kb upstream 0.5kb upstream 1191 true Chr5: 2622030-2623220 Arabidopsis thaliana
AT5G08150 0.5kb upstream 0.5kb upstream 500 false Chr5: 2622721-2623220 Arabidopsis thaliana
AT5G08150 0.5kb downstream 0.5kb downstream 1191 true Chr5: 2621530-2622720 Arabidopsis thaliana
AT5G08150 0.5kb downstream 0.5kb downstream 500 false Chr5: 2621530-2622029 Arabidopsis thaliana
AT5G08150 1.0kb upstream 1.0kb upstream 1691 true Chr5: 2622030-2623720 Arabidopsis thaliana
AT5G08150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2622721-2623720 Arabidopsis thaliana
AT5G08150 1.0kb downstream 1.0kb downstream 1691 true Chr5: 2621030-2622720 Arabidopsis thaliana
AT5G08150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2621030-2622029 Arabidopsis thaliana
AT5G08150 2.0kb upstream 2.0kb upstream 2691 true Chr5: 2622030-2624720 Arabidopsis thaliana
AT5G08150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2622721-2624720 Arabidopsis thaliana
AT5G08150 2.0kb downstream 2.0kb downstream 2691 true Chr5: 2620030-2622720 Arabidopsis thaliana
AT5G08150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2620030-2622029 Arabidopsis thaliana
AT5G08150 5.0kb upstream 5.0kb upstream 5691 true Chr5: 2622030-2627720 Arabidopsis thaliana
AT5G08150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2622721-2627720 Arabidopsis thaliana
AT5G08150 5.0kb downstream 5.0kb downstream 5691 true Chr5: 2617030-2622720 Arabidopsis thaliana
AT5G08150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2617030-2622029 Arabidopsis thaliana
AT5G08150 10.0kb upstream 10.0kb upstream 10691 true Chr5: 2622030-2632720 Arabidopsis thaliana
AT5G08150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2622721-2632720 Arabidopsis thaliana
AT5G08150 10.0kb downstream 10.0kb downstream 10691 true Chr5: 2612030-2622720 Arabidopsis thaliana
AT5G08150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2612030-2622029 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028773 5273 Angiosperm View MSA
122366252 5261 Brassicaceae View MSA
123799138 5264 Brassicales-Malvales View MSA
124296687 5266 SBM View MSA
124148766 5268 Malvidae View MSA
123874702 5270 Rosid View MSA
123745811 5271 Pentapetalae View MSA
122796444 5272 Eudicot View MSA
121298217 5274 Embryophyte View MSA
123336203 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17        
cufflinks 0.044     Low  
cufflinks 8.275       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.6        
cufflinks 0.022     Low Low

0 Strain