Gene : NF-YB12 A. thaliana TAIR10
Primary Identifier:  ? AT5G08190 Defline:  (1 of 2) PTHR11064//PTHR11064:SF35 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // PROTEIN DR1 HOMOLOG
Genomic Order:  760 Name:  ? AT5G08190
Secondary Identifier:  ? PAC:19668266
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08190 0.5kb upstream 0.5kb upstream 2032 true Chr5: 2635402-2637433 Arabidopsis thaliana
AT5G08190 0.5kb upstream 0.5kb upstream 500 false Chr5: 2635402-2635901 Arabidopsis thaliana
AT5G08190 0.5kb downstream 0.5kb downstream 2032 true Chr5: 2635902-2637933 Arabidopsis thaliana
AT5G08190 0.5kb downstream 0.5kb downstream 500 false Chr5: 2637434-2637933 Arabidopsis thaliana
AT5G08190 1.0kb upstream 1.0kb upstream 2532 true Chr5: 2634902-2637433 Arabidopsis thaliana
AT5G08190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2634902-2635901 Arabidopsis thaliana
AT5G08190 1.0kb downstream 1.0kb downstream 2532 true Chr5: 2635902-2638433 Arabidopsis thaliana
AT5G08190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2637434-2638433 Arabidopsis thaliana
AT5G08190 2.0kb upstream 2.0kb upstream 3532 true Chr5: 2633902-2637433 Arabidopsis thaliana
AT5G08190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2633902-2635901 Arabidopsis thaliana
AT5G08190 2.0kb downstream 2.0kb downstream 3532 true Chr5: 2635902-2639433 Arabidopsis thaliana
AT5G08190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2637434-2639433 Arabidopsis thaliana
AT5G08190 5.0kb upstream 5.0kb upstream 6532 true Chr5: 2630902-2637433 Arabidopsis thaliana
AT5G08190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2630902-2635901 Arabidopsis thaliana
AT5G08190 5.0kb downstream 5.0kb downstream 6532 true Chr5: 2635902-2642433 Arabidopsis thaliana
AT5G08190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2637434-2642433 Arabidopsis thaliana
AT5G08190 10.0kb upstream 10.0kb upstream 11532 true Chr5: 2625902-2637433 Arabidopsis thaliana
AT5G08190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2625902-2635901 Arabidopsis thaliana
AT5G08190 10.0kb downstream 10.0kb downstream 11532 true Chr5: 2635902-2647433 Arabidopsis thaliana
AT5G08190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2637434-2647433 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372646 5261 Brassicaceae View MSA
123839724 5264 Brassicales-Malvales View MSA
124337372 5266 SBM View MSA
124243742 5268 Malvidae View MSA
124066760 5270 Rosid View MSA
123746342 5271 Pentapetalae View MSA
122796163 5272 Eudicot View MSA
122043494 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121351075 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.464        
cufflinks 6.933        
cufflinks 4.168       Low
cufflinks 7.971       High
cufflinks 4.388       Low
cufflinks 7.569        

0 Strain