Gene : AT5G08030 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23344//PTHR23344:SF19 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // SUBFAMILY NOT NAMED Genomic Order:  741
Name:  ? AT5G08030 Secondary Identifier:  ? PAC:19668314
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7409 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08030 0.5kb upstream 0.5kb upstream 2251 true Chr5: 2575033-2577283 Arabidopsis thaliana
AT5G08030 0.5kb upstream 0.5kb upstream 500 false Chr5: 2576784-2577283 Arabidopsis thaliana
AT5G08030 0.5kb downstream 0.5kb downstream 2251 true Chr5: 2574533-2576783 Arabidopsis thaliana
AT5G08030 0.5kb downstream 0.5kb downstream 500 false Chr5: 2574533-2575032 Arabidopsis thaliana
AT5G08030 1.0kb upstream 1.0kb upstream 2751 true Chr5: 2575033-2577783 Arabidopsis thaliana
AT5G08030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2576784-2577783 Arabidopsis thaliana
AT5G08030 1.0kb downstream 1.0kb downstream 2751 true Chr5: 2574033-2576783 Arabidopsis thaliana
AT5G08030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2574033-2575032 Arabidopsis thaliana
AT5G08030 2.0kb upstream 2.0kb upstream 3751 true Chr5: 2575033-2578783 Arabidopsis thaliana
AT5G08030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2576784-2578783 Arabidopsis thaliana
AT5G08030 2.0kb downstream 2.0kb downstream 3751 true Chr5: 2573033-2576783 Arabidopsis thaliana
AT5G08030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2573033-2575032 Arabidopsis thaliana
AT5G08030 5.0kb upstream 5.0kb upstream 6751 true Chr5: 2575033-2581783 Arabidopsis thaliana
AT5G08030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2576784-2581783 Arabidopsis thaliana
AT5G08030 5.0kb downstream 5.0kb downstream 6751 true Chr5: 2570033-2576783 Arabidopsis thaliana
AT5G08030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2570033-2575032 Arabidopsis thaliana
AT5G08030 10.0kb upstream 10.0kb upstream 11751 true Chr5: 2575033-2586783 Arabidopsis thaliana
AT5G08030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2576784-2586783 Arabidopsis thaliana
AT5G08030 10.0kb downstream 10.0kb downstream 11751 true Chr5: 2565033-2576783 Arabidopsis thaliana
AT5G08030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2565033-2575032 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360821 5261 Brassicaceae View MSA
123837095 5264 Brassicales-Malvales View MSA
124341825 5266 SBM View MSA
124250992 5268 Malvidae View MSA
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131     Low  
cufflinks 0.095     Low  
cufflinks 0.532        
cufflinks 0.146     Low  
cufflinks 1.533       High
cufflinks 0.098     Low  

0 Strain