Gene : AT5G07780 A. thaliana TAIR10
Defline:  (1 of 5) PTHR23213//PTHR23213:SF210 - FORMIN-RELATED // FORMIN-LIKE PROTEIN 15A-RELATED Genomic Order:  715
Name:  ? AT5G07780 Secondary Identifier:  ? PAC:19670682
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07780 0.5kb upstream 0.5kb upstream 3837 true Chr5: 2479014-2482850 Arabidopsis thaliana
AT5G07780 0.5kb upstream 0.5kb upstream 500 false Chr5: 2479014-2479513 Arabidopsis thaliana
AT5G07780 0.5kb downstream 0.5kb downstream 3837 true Chr5: 2479514-2483350 Arabidopsis thaliana
AT5G07780 0.5kb downstream 0.5kb downstream 500 false Chr5: 2482851-2483350 Arabidopsis thaliana
AT5G07780 1.0kb upstream 1.0kb upstream 4337 true Chr5: 2478514-2482850 Arabidopsis thaliana
AT5G07780 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2478514-2479513 Arabidopsis thaliana
AT5G07780 1.0kb downstream 1.0kb downstream 4337 true Chr5: 2479514-2483850 Arabidopsis thaliana
AT5G07780 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2482851-2483850 Arabidopsis thaliana
AT5G07780 2.0kb upstream 2.0kb upstream 5337 true Chr5: 2477514-2482850 Arabidopsis thaliana
AT5G07780 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2477514-2479513 Arabidopsis thaliana
AT5G07780 2.0kb downstream 2.0kb downstream 5337 true Chr5: 2479514-2484850 Arabidopsis thaliana
AT5G07780 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2482851-2484850 Arabidopsis thaliana
AT5G07780 5.0kb upstream 5.0kb upstream 8337 true Chr5: 2474514-2482850 Arabidopsis thaliana
AT5G07780 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2474514-2479513 Arabidopsis thaliana
AT5G07780 5.0kb downstream 5.0kb downstream 8337 true Chr5: 2479514-2487850 Arabidopsis thaliana
AT5G07780 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2482851-2487850 Arabidopsis thaliana
AT5G07780 10.0kb upstream 10.0kb upstream 13337 true Chr5: 2469514-2482850 Arabidopsis thaliana
AT5G07780 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2469514-2479513 Arabidopsis thaliana
AT5G07780 10.0kb downstream 10.0kb downstream 13337 true Chr5: 2479514-2492850 Arabidopsis thaliana
AT5G07780 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2482851-2492850 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379342 5261 Brassicaceae View MSA
123802217 5264 Brassicales-Malvales View MSA
124299431 5266 SBM View MSA
124250189 5268 Malvidae View MSA
124073350 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.774       High
cufflinks 0.368        
cufflinks 0.138     Low Low
cufflinks 0.399     Low  
cufflinks 0.183     Low  
cufflinks 0.409        

0 Strain