Gene : AT5G07580 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31677//PTHR31677:SF24 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106 Genomic Order:  696
Name:  ? AT5G07580 Secondary Identifier:  ? PAC:19672762
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07580 0.5kb upstream 0.5kb upstream 1598 true Chr5: 2399004-2400601 Arabidopsis thaliana
AT5G07580 0.5kb upstream 0.5kb upstream 500 false Chr5: 2399004-2399503 Arabidopsis thaliana
AT5G07580 0.5kb downstream 0.5kb downstream 1598 true Chr5: 2399504-2401101 Arabidopsis thaliana
AT5G07580 0.5kb downstream 0.5kb downstream 500 false Chr5: 2400602-2401101 Arabidopsis thaliana
AT5G07580 1.0kb upstream 1.0kb upstream 2098 true Chr5: 2398504-2400601 Arabidopsis thaliana
AT5G07580 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2398504-2399503 Arabidopsis thaliana
AT5G07580 1.0kb downstream 1.0kb downstream 2098 true Chr5: 2399504-2401601 Arabidopsis thaliana
AT5G07580 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2400602-2401601 Arabidopsis thaliana
AT5G07580 2.0kb upstream 2.0kb upstream 3098 true Chr5: 2397504-2400601 Arabidopsis thaliana
AT5G07580 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2397504-2399503 Arabidopsis thaliana
AT5G07580 2.0kb downstream 2.0kb downstream 3098 true Chr5: 2399504-2402601 Arabidopsis thaliana
AT5G07580 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2400602-2402601 Arabidopsis thaliana
AT5G07580 5.0kb upstream 5.0kb upstream 6098 true Chr5: 2394504-2400601 Arabidopsis thaliana
AT5G07580 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2394504-2399503 Arabidopsis thaliana
AT5G07580 5.0kb downstream 5.0kb downstream 6098 true Chr5: 2399504-2405601 Arabidopsis thaliana
AT5G07580 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2400602-2405601 Arabidopsis thaliana
AT5G07580 10.0kb upstream 10.0kb upstream 11098 true Chr5: 2389504-2400601 Arabidopsis thaliana
AT5G07580 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2389504-2399503 Arabidopsis thaliana
AT5G07580 10.0kb downstream 10.0kb downstream 11098 true Chr5: 2399504-2410601 Arabidopsis thaliana
AT5G07580 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2400602-2410601 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331472 5261 Brassicaceae Singleton cluster - no MSA
123772657 5264 Brassicales-Malvales Singleton cluster - no MSA
124271166 5266 SBM Singleton cluster - no MSA
124248001 5268 Malvidae View MSA
124040353 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.098     High  
cufflinks 56.095     High  
cufflinks 26.729     High Low
cufflinks 81.828     High High
cufflinks 41.552     High  
cufflinks 51.479     High  

0 Strain