Gene : AT5G07430 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  678
Name:  ? AT5G07430 Secondary Identifier:  ? PAC:19668396
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07430 0.5kb upstream 0.5kb upstream 2264 true Chr5: 2351939-2354202 Arabidopsis thaliana
AT5G07430 0.5kb upstream 0.5kb upstream 500 false Chr5: 2351939-2352438 Arabidopsis thaliana
AT5G07430 0.5kb downstream 0.5kb downstream 2264 true Chr5: 2352439-2354702 Arabidopsis thaliana
AT5G07430 0.5kb downstream 0.5kb downstream 500 false Chr5: 2354203-2354702 Arabidopsis thaliana
AT5G07430 1.0kb upstream 1.0kb upstream 2764 true Chr5: 2351439-2354202 Arabidopsis thaliana
AT5G07430 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2351439-2352438 Arabidopsis thaliana
AT5G07430 1.0kb downstream 1.0kb downstream 2764 true Chr5: 2352439-2355202 Arabidopsis thaliana
AT5G07430 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2354203-2355202 Arabidopsis thaliana
AT5G07430 2.0kb upstream 2.0kb upstream 3764 true Chr5: 2350439-2354202 Arabidopsis thaliana
AT5G07430 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2350439-2352438 Arabidopsis thaliana
AT5G07430 2.0kb downstream 2.0kb downstream 3764 true Chr5: 2352439-2356202 Arabidopsis thaliana
AT5G07430 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2354203-2356202 Arabidopsis thaliana
AT5G07430 5.0kb upstream 5.0kb upstream 6764 true Chr5: 2347439-2354202 Arabidopsis thaliana
AT5G07430 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2347439-2352438 Arabidopsis thaliana
AT5G07430 5.0kb downstream 5.0kb downstream 6764 true Chr5: 2352439-2359202 Arabidopsis thaliana
AT5G07430 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2354203-2359202 Arabidopsis thaliana
AT5G07430 10.0kb upstream 10.0kb upstream 11764 true Chr5: 2342439-2354202 Arabidopsis thaliana
AT5G07430 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2342439-2352438 Arabidopsis thaliana
AT5G07430 10.0kb downstream 10.0kb downstream 11764 true Chr5: 2352439-2364202 Arabidopsis thaliana
AT5G07430 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2354203-2364202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372644 5261 Brassicaceae View MSA
123800403 5264 Brassicales-Malvales View MSA
124297818 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  

0 Strain