Gene : GDH2 A. thaliana TAIR10
Primary Identifier:  ? AT5G07440 Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase
Genomic Order:  679 Name:  ? AT5G07440
Secondary Identifier:  ? PAC:19667332
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGININE-SYN4-PWY Arabidopsis thaliana pathologic  
Athaliana GLUDEG-I-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07440 0.5kb upstream 0.5kb upstream 2758 true Chr5: 2355437-2358194 Arabidopsis thaliana
AT5G07440 0.5kb upstream 0.5kb upstream 500 false Chr5: 2355437-2355936 Arabidopsis thaliana
AT5G07440 0.5kb downstream 0.5kb downstream 2758 true Chr5: 2355937-2358694 Arabidopsis thaliana
AT5G07440 0.5kb downstream 0.5kb downstream 500 false Chr5: 2358195-2358694 Arabidopsis thaliana
AT5G07440 1.0kb upstream 1.0kb upstream 3258 true Chr5: 2354937-2358194 Arabidopsis thaliana
AT5G07440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2354937-2355936 Arabidopsis thaliana
AT5G07440 1.0kb downstream 1.0kb downstream 3258 true Chr5: 2355937-2359194 Arabidopsis thaliana
AT5G07440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2358195-2359194 Arabidopsis thaliana
AT5G07440 2.0kb upstream 2.0kb upstream 4258 true Chr5: 2353937-2358194 Arabidopsis thaliana
AT5G07440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2353937-2355936 Arabidopsis thaliana
AT5G07440 2.0kb downstream 2.0kb downstream 4258 true Chr5: 2355937-2360194 Arabidopsis thaliana
AT5G07440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2358195-2360194 Arabidopsis thaliana
AT5G07440 5.0kb upstream 5.0kb upstream 7258 true Chr5: 2350937-2358194 Arabidopsis thaliana
AT5G07440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2350937-2355936 Arabidopsis thaliana
AT5G07440 5.0kb downstream 5.0kb downstream 7258 true Chr5: 2355937-2363194 Arabidopsis thaliana
AT5G07440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2358195-2363194 Arabidopsis thaliana
AT5G07440 10.0kb upstream 10.0kb upstream 12258 true Chr5: 2345937-2358194 Arabidopsis thaliana
AT5G07440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2345937-2355936 Arabidopsis thaliana
AT5G07440 10.0kb downstream 10.0kb downstream 12258 true Chr5: 2355937-2368194 Arabidopsis thaliana
AT5G07440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2358195-2368194 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381048 5261 Brassicaceae View MSA
123840099 5264 Brassicales-Malvales View MSA
124351160 5266 SBM View MSA
124247496 5268 Malvidae View MSA
124068795 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.458       Low
cufflinks 39.595     High  
cufflinks 43.155     High  
cufflinks 75.772     High  
cufflinks 103.558     High High
cufflinks 17.069        

0 Strain