Gene : AT5G07420 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  677
Name:  ? AT5G07420 Secondary Identifier:  ? PAC:19673007
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07420 0.5kb upstream 0.5kb upstream 2555 true Chr5: 2348955-2351509 Arabidopsis thaliana
AT5G07420 0.5kb upstream 0.5kb upstream 500 false Chr5: 2348955-2349454 Arabidopsis thaliana
AT5G07420 0.5kb downstream 0.5kb downstream 2555 true Chr5: 2349455-2352009 Arabidopsis thaliana
AT5G07420 0.5kb downstream 0.5kb downstream 500 false Chr5: 2351510-2352009 Arabidopsis thaliana
AT5G07420 1.0kb upstream 1.0kb upstream 3055 true Chr5: 2348455-2351509 Arabidopsis thaliana
AT5G07420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2348455-2349454 Arabidopsis thaliana
AT5G07420 1.0kb downstream 1.0kb downstream 3055 true Chr5: 2349455-2352509 Arabidopsis thaliana
AT5G07420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2351510-2352509 Arabidopsis thaliana
AT5G07420 2.0kb upstream 2.0kb upstream 4055 true Chr5: 2347455-2351509 Arabidopsis thaliana
AT5G07420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2347455-2349454 Arabidopsis thaliana
AT5G07420 2.0kb downstream 2.0kb downstream 4055 true Chr5: 2349455-2353509 Arabidopsis thaliana
AT5G07420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2351510-2353509 Arabidopsis thaliana
AT5G07420 5.0kb upstream 5.0kb upstream 7055 true Chr5: 2344455-2351509 Arabidopsis thaliana
AT5G07420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2344455-2349454 Arabidopsis thaliana
AT5G07420 5.0kb downstream 5.0kb downstream 7055 true Chr5: 2349455-2356509 Arabidopsis thaliana
AT5G07420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2351510-2356509 Arabidopsis thaliana
AT5G07420 10.0kb upstream 10.0kb upstream 12055 true Chr5: 2339455-2351509 Arabidopsis thaliana
AT5G07420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2339455-2349454 Arabidopsis thaliana
AT5G07420 10.0kb downstream 10.0kb downstream 12055 true Chr5: 2349455-2361509 Arabidopsis thaliana
AT5G07420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2351510-2361509 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372248 5261 Brassicaceae View MSA
123841334 5264 Brassicales-Malvales View MSA
124322903 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain