Gene : PMSR2 A. thaliana TAIR10
Primary Identifier:  ? AT5G07460 Defline:  (1 of 4) K07304 - peptide-methionine (S)-S-oxide reductase (msrA)
Genomic Order:  681 Name:  ? AT5G07460
Secondary Identifier:  ? PAC:19669684
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07460 0.5kb upstream 0.5kb upstream 1880 true Chr5: 2360634-2362513 Arabidopsis thaliana
AT5G07460 0.5kb upstream 0.5kb upstream 500 false Chr5: 2362014-2362513 Arabidopsis thaliana
AT5G07460 0.5kb downstream 0.5kb downstream 1880 true Chr5: 2360134-2362013 Arabidopsis thaliana
AT5G07460 0.5kb downstream 0.5kb downstream 500 false Chr5: 2360134-2360633 Arabidopsis thaliana
AT5G07460 1.0kb upstream 1.0kb upstream 2380 true Chr5: 2360634-2363013 Arabidopsis thaliana
AT5G07460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2362014-2363013 Arabidopsis thaliana
AT5G07460 1.0kb downstream 1.0kb downstream 2380 true Chr5: 2359634-2362013 Arabidopsis thaliana
AT5G07460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2359634-2360633 Arabidopsis thaliana
AT5G07460 2.0kb upstream 2.0kb upstream 3380 true Chr5: 2360634-2364013 Arabidopsis thaliana
AT5G07460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2362014-2364013 Arabidopsis thaliana
AT5G07460 2.0kb downstream 2.0kb downstream 3380 true Chr5: 2358634-2362013 Arabidopsis thaliana
AT5G07460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2358634-2360633 Arabidopsis thaliana
AT5G07460 5.0kb upstream 5.0kb upstream 6380 true Chr5: 2360634-2367013 Arabidopsis thaliana
AT5G07460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2362014-2367013 Arabidopsis thaliana
AT5G07460 5.0kb downstream 5.0kb downstream 6380 true Chr5: 2355634-2362013 Arabidopsis thaliana
AT5G07460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2355634-2360633 Arabidopsis thaliana
AT5G07460 10.0kb upstream 10.0kb upstream 11380 true Chr5: 2360634-2372013 Arabidopsis thaliana
AT5G07460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2362014-2372013 Arabidopsis thaliana
AT5G07460 10.0kb downstream 10.0kb downstream 11380 true Chr5: 2350634-2362013 Arabidopsis thaliana
AT5G07460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2350634-2360633 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381500 5261 Brassicaceae View MSA
123803276 5264 Brassicales-Malvales View MSA
124300396 5266 SBM View MSA
124151586 5268 Malvidae View MSA
123876987 5270 Rosid View MSA
123460584 5271 Pentapetalae View MSA
122495953 5272 Eudicot View MSA
122050305 5273 Angiosperm View MSA
121349628 5274 Embryophyte View MSA
123428576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7        
cufflinks 17.082        
cufflinks 18.712        
cufflinks 31.102     High High
cufflinks 17.204        
cufflinks 24.724        

0 Strain