Gene : PEI1 A. thaliana TAIR10
Primary Identifier:  ? AT5G07500 Defline:  (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH)
Genomic Order:  686 Name:  ? AT5G07500
Secondary Identifier:  ? PAC:19669659
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07500 0.5kb upstream 0.5kb upstream 1537 true Chr5: 2372119-2373655 Arabidopsis thaliana
AT5G07500 0.5kb upstream 0.5kb upstream 500 false Chr5: 2372119-2372618 Arabidopsis thaliana
AT5G07500 0.5kb downstream 0.5kb downstream 1537 true Chr5: 2372619-2374155 Arabidopsis thaliana
AT5G07500 0.5kb downstream 0.5kb downstream 500 false Chr5: 2373656-2374155 Arabidopsis thaliana
AT5G07500 1.0kb upstream 1.0kb upstream 2037 true Chr5: 2371619-2373655 Arabidopsis thaliana
AT5G07500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2371619-2372618 Arabidopsis thaliana
AT5G07500 1.0kb downstream 1.0kb downstream 2037 true Chr5: 2372619-2374655 Arabidopsis thaliana
AT5G07500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2373656-2374655 Arabidopsis thaliana
AT5G07500 2.0kb upstream 2.0kb upstream 3037 true Chr5: 2370619-2373655 Arabidopsis thaliana
AT5G07500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2370619-2372618 Arabidopsis thaliana
AT5G07500 2.0kb downstream 2.0kb downstream 3037 true Chr5: 2372619-2375655 Arabidopsis thaliana
AT5G07500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2373656-2375655 Arabidopsis thaliana
AT5G07500 5.0kb upstream 5.0kb upstream 6037 true Chr5: 2367619-2373655 Arabidopsis thaliana
AT5G07500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2367619-2372618 Arabidopsis thaliana
AT5G07500 5.0kb downstream 5.0kb downstream 6037 true Chr5: 2372619-2378655 Arabidopsis thaliana
AT5G07500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2373656-2378655 Arabidopsis thaliana
AT5G07500 10.0kb upstream 10.0kb upstream 11037 true Chr5: 2362619-2373655 Arabidopsis thaliana
AT5G07500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2362619-2372618 Arabidopsis thaliana
AT5G07500 10.0kb downstream 10.0kb downstream 11037 true Chr5: 2372619-2383655 Arabidopsis thaliana
AT5G07500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2373656-2383655 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367490 5261 Brassicaceae View MSA
123834172 5264 Brassicales-Malvales View MSA
124337687 5266 SBM View MSA
124244497 5268 Malvidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.266       High
cufflinks 0.037     Low  
cufflinks 0.221     Low  
cufflinks 0.064     Low  

0 Strain