Gene : KUOX1 A. thaliana TAIR10
Primary Identifier:  ? AT5G07480 Defline:  (1 of 1) PTHR10209//PTHR10209:SF201 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // KAR-UP OXIDOREDUCTASE 1
Genomic Order:  684 Name:  ? AT5G07480
Secondary Identifier:  ? PAC:19671440
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY1F-823 Arabidopsis thaliana pathologic  
Athaliana PWY1F-FLAVSYN Arabidopsis thaliana pathologic  
Athaliana PWY-5059 Arabidopsis thaliana pathologic  
Athaliana PWY-5152 Arabidopsis thaliana pathologic  
Athaliana PWY-6787 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07480 0.5kb upstream 0.5kb upstream 2888 true Chr5: 2366667-2369554 Arabidopsis thaliana
AT5G07480 0.5kb upstream 0.5kb upstream 500 false Chr5: 2366667-2367166 Arabidopsis thaliana
AT5G07480 0.5kb downstream 0.5kb downstream 2888 true Chr5: 2367167-2370054 Arabidopsis thaliana
AT5G07480 0.5kb downstream 0.5kb downstream 500 false Chr5: 2369555-2370054 Arabidopsis thaliana
AT5G07480 1.0kb upstream 1.0kb upstream 3388 true Chr5: 2366167-2369554 Arabidopsis thaliana
AT5G07480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2366167-2367166 Arabidopsis thaliana
AT5G07480 1.0kb downstream 1.0kb downstream 3388 true Chr5: 2367167-2370554 Arabidopsis thaliana
AT5G07480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2369555-2370554 Arabidopsis thaliana
AT5G07480 2.0kb upstream 2.0kb upstream 4388 true Chr5: 2365167-2369554 Arabidopsis thaliana
AT5G07480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2365167-2367166 Arabidopsis thaliana
AT5G07480 2.0kb downstream 2.0kb downstream 4388 true Chr5: 2367167-2371554 Arabidopsis thaliana
AT5G07480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2369555-2371554 Arabidopsis thaliana
AT5G07480 5.0kb upstream 5.0kb upstream 7388 true Chr5: 2362167-2369554 Arabidopsis thaliana
AT5G07480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2362167-2367166 Arabidopsis thaliana
AT5G07480 5.0kb downstream 5.0kb downstream 7388 true Chr5: 2367167-2374554 Arabidopsis thaliana
AT5G07480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2369555-2374554 Arabidopsis thaliana
AT5G07480 10.0kb upstream 10.0kb upstream 12388 true Chr5: 2357167-2369554 Arabidopsis thaliana
AT5G07480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2357167-2367166 Arabidopsis thaliana
AT5G07480 10.0kb downstream 10.0kb downstream 12388 true Chr5: 2367167-2379554 Arabidopsis thaliana
AT5G07480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2369555-2379554 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378921 5261 Brassicaceae View MSA
123837487 5264 Brassicales-Malvales View MSA
124349798 5266 SBM View MSA
124248174 5268 Malvidae View MSA
124071702 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain