Gene : BON2 A. thaliana TAIR10
Primary Identifier:  ? AT5G07300 Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3
Genomic Order:  665 Name:  ? AT5G07300
Secondary Identifier:  ? PAC:19665301
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07300 0.5kb upstream 0.5kb upstream 3882 true Chr5: 2299387-2303268 Arabidopsis thaliana
AT5G07300 0.5kb upstream 0.5kb upstream 500 false Chr5: 2299387-2299886 Arabidopsis thaliana
AT5G07300 0.5kb downstream 0.5kb downstream 3882 true Chr5: 2299887-2303768 Arabidopsis thaliana
AT5G07300 0.5kb downstream 0.5kb downstream 500 false Chr5: 2303269-2303768 Arabidopsis thaliana
AT5G07300 1.0kb upstream 1.0kb upstream 4382 true Chr5: 2298887-2303268 Arabidopsis thaliana
AT5G07300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2298887-2299886 Arabidopsis thaliana
AT5G07300 1.0kb downstream 1.0kb downstream 4382 true Chr5: 2299887-2304268 Arabidopsis thaliana
AT5G07300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2303269-2304268 Arabidopsis thaliana
AT5G07300 2.0kb upstream 2.0kb upstream 5382 true Chr5: 2297887-2303268 Arabidopsis thaliana
AT5G07300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2297887-2299886 Arabidopsis thaliana
AT5G07300 2.0kb downstream 2.0kb downstream 5382 true Chr5: 2299887-2305268 Arabidopsis thaliana
AT5G07300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2303269-2305268 Arabidopsis thaliana
AT5G07300 5.0kb upstream 5.0kb upstream 8382 true Chr5: 2294887-2303268 Arabidopsis thaliana
AT5G07300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2294887-2299886 Arabidopsis thaliana
AT5G07300 5.0kb downstream 5.0kb downstream 8382 true Chr5: 2299887-2308268 Arabidopsis thaliana
AT5G07300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2303269-2308268 Arabidopsis thaliana
AT5G07300 10.0kb upstream 10.0kb upstream 13382 true Chr5: 2289887-2303268 Arabidopsis thaliana
AT5G07300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2289887-2299886 Arabidopsis thaliana
AT5G07300 10.0kb downstream 10.0kb downstream 13382 true Chr5: 2299887-2313268 Arabidopsis thaliana
AT5G07300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2303269-2313268 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376204 5261 Brassicaceae View MSA
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.441        
cufflinks 21.418        
cufflinks 12.628       Low
cufflinks 22.135        
cufflinks 13.189       Low
cufflinks 20.922        

0 Strain