Gene : AT5G07340 A. thaliana TAIR10
Defline:  (1 of 2) K08054 - calnexin (CANX) Genomic Order:  669
Name:  ? AT5G07340 Secondary Identifier:  ? PAC:19668767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07340 0.5kb upstream 0.5kb upstream 2937 true Chr5: 2316713-2319649 Arabidopsis thaliana
AT5G07340 0.5kb upstream 0.5kb upstream 500 false Chr5: 2316713-2317212 Arabidopsis thaliana
AT5G07340 0.5kb downstream 0.5kb downstream 2937 true Chr5: 2317213-2320149 Arabidopsis thaliana
AT5G07340 0.5kb downstream 0.5kb downstream 500 false Chr5: 2319650-2320149 Arabidopsis thaliana
AT5G07340 1.0kb upstream 1.0kb upstream 3437 true Chr5: 2316213-2319649 Arabidopsis thaliana
AT5G07340 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2316213-2317212 Arabidopsis thaliana
AT5G07340 1.0kb downstream 1.0kb downstream 3437 true Chr5: 2317213-2320649 Arabidopsis thaliana
AT5G07340 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2319650-2320649 Arabidopsis thaliana
AT5G07340 2.0kb upstream 2.0kb upstream 4437 true Chr5: 2315213-2319649 Arabidopsis thaliana
AT5G07340 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2315213-2317212 Arabidopsis thaliana
AT5G07340 2.0kb downstream 2.0kb downstream 4437 true Chr5: 2317213-2321649 Arabidopsis thaliana
AT5G07340 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2319650-2321649 Arabidopsis thaliana
AT5G07340 5.0kb upstream 5.0kb upstream 7437 true Chr5: 2312213-2319649 Arabidopsis thaliana
AT5G07340 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2312213-2317212 Arabidopsis thaliana
AT5G07340 5.0kb downstream 5.0kb downstream 7437 true Chr5: 2317213-2324649 Arabidopsis thaliana
AT5G07340 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2319650-2324649 Arabidopsis thaliana
AT5G07340 10.0kb upstream 10.0kb upstream 12437 true Chr5: 2307213-2319649 Arabidopsis thaliana
AT5G07340 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2307213-2317212 Arabidopsis thaliana
AT5G07340 10.0kb downstream 10.0kb downstream 12437 true Chr5: 2317213-2329649 Arabidopsis thaliana
AT5G07340 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2319650-2329649 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375815 5261 Brassicaceae View MSA
123838542 5264 Brassicales-Malvales View MSA
124336483 5266 SBM View MSA
124243434 5268 Malvidae View MSA
124065141 5270 Rosid View MSA
123737774 5271 Pentapetalae View MSA
122786584 5272 Eudicot View MSA
122045156 5273 Angiosperm View MSA
121344983 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.177        
cufflinks 20.903        
cufflinks 11.865       Low
cufflinks 22.883       High
cufflinks 13.982        
cufflinks 17.763        

0 Strain