Gene : RBK1 A. thaliana TAIR10
Primary Identifier:  ? AT5G10520 Defline:  (1 of 2) PTHR27001//PTHR27001:SF105 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED
Genomic Order:  973 Name:  ? AT5G10520
Secondary Identifier:  ? PAC:19672626
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10520 0.5kb upstream 0.5kb upstream 3041 true Chr5: 3320370-3323410 Arabidopsis thaliana
AT5G10520 0.5kb upstream 0.5kb upstream 500 false Chr5: 3322911-3323410 Arabidopsis thaliana
AT5G10520 0.5kb downstream 0.5kb downstream 3041 true Chr5: 3319870-3322910 Arabidopsis thaliana
AT5G10520 0.5kb downstream 0.5kb downstream 500 false Chr5: 3319870-3320369 Arabidopsis thaliana
AT5G10520 1.0kb upstream 1.0kb upstream 3541 true Chr5: 3320370-3323910 Arabidopsis thaliana
AT5G10520 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3322911-3323910 Arabidopsis thaliana
AT5G10520 1.0kb downstream 1.0kb downstream 3541 true Chr5: 3319370-3322910 Arabidopsis thaliana
AT5G10520 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3319370-3320369 Arabidopsis thaliana
AT5G10520 2.0kb upstream 2.0kb upstream 4541 true Chr5: 3320370-3324910 Arabidopsis thaliana
AT5G10520 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3322911-3324910 Arabidopsis thaliana
AT5G10520 2.0kb downstream 2.0kb downstream 4541 true Chr5: 3318370-3322910 Arabidopsis thaliana
AT5G10520 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3318370-3320369 Arabidopsis thaliana
AT5G10520 5.0kb upstream 5.0kb upstream 7541 true Chr5: 3320370-3327910 Arabidopsis thaliana
AT5G10520 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3322911-3327910 Arabidopsis thaliana
AT5G10520 5.0kb downstream 5.0kb downstream 7541 true Chr5: 3315370-3322910 Arabidopsis thaliana
AT5G10520 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3315370-3320369 Arabidopsis thaliana
AT5G10520 10.0kb upstream 10.0kb upstream 12541 true Chr5: 3320370-3332910 Arabidopsis thaliana
AT5G10520 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3322911-3332910 Arabidopsis thaliana
AT5G10520 10.0kb downstream 10.0kb downstream 12541 true Chr5: 3310370-3322910 Arabidopsis thaliana
AT5G10520 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3310370-3320369 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375153 5261 Brassicaceae View MSA
123840795 5264 Brassicales-Malvales View MSA
124350781 5266 SBM View MSA
124238413 5268 Malvidae View MSA
124063504 5270 Rosid View MSA
123745294 5271 Pentapetalae View MSA
122793623 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.966        
cufflinks 9.37        
cufflinks 0.466       Low
cufflinks 10.1       High
cufflinks 0.876        
cufflinks 6.063        

0 Strain