Gene : AT5G10460 A. thaliana TAIR10
Defline:  (1 of 1) PTHR19288//PTHR19288:SF3 - 4-NITROPHENYLPHOSPHATASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  966
Name:  ? AT5G10460 Secondary Identifier:  ? PAC:19667721
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10460 0.5kb upstream 0.5kb upstream 2668 true Chr5: 3287281-3289948 Arabidopsis thaliana
AT5G10460 0.5kb upstream 0.5kb upstream 500 false Chr5: 3287281-3287780 Arabidopsis thaliana
AT5G10460 0.5kb downstream 0.5kb downstream 2668 true Chr5: 3287781-3290448 Arabidopsis thaliana
AT5G10460 0.5kb downstream 0.5kb downstream 500 false Chr5: 3289949-3290448 Arabidopsis thaliana
AT5G10460 1.0kb upstream 1.0kb upstream 3168 true Chr5: 3286781-3289948 Arabidopsis thaliana
AT5G10460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3286781-3287780 Arabidopsis thaliana
AT5G10460 1.0kb downstream 1.0kb downstream 3168 true Chr5: 3287781-3290948 Arabidopsis thaliana
AT5G10460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3289949-3290948 Arabidopsis thaliana
AT5G10460 2.0kb upstream 2.0kb upstream 4168 true Chr5: 3285781-3289948 Arabidopsis thaliana
AT5G10460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3285781-3287780 Arabidopsis thaliana
AT5G10460 2.0kb downstream 2.0kb downstream 4168 true Chr5: 3287781-3291948 Arabidopsis thaliana
AT5G10460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3289949-3291948 Arabidopsis thaliana
AT5G10460 5.0kb upstream 5.0kb upstream 7168 true Chr5: 3282781-3289948 Arabidopsis thaliana
AT5G10460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3282781-3287780 Arabidopsis thaliana
AT5G10460 5.0kb downstream 5.0kb downstream 7168 true Chr5: 3287781-3294948 Arabidopsis thaliana
AT5G10460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3289949-3294948 Arabidopsis thaliana
AT5G10460 10.0kb upstream 10.0kb upstream 12168 true Chr5: 3277781-3289948 Arabidopsis thaliana
AT5G10460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3277781-3287780 Arabidopsis thaliana
AT5G10460 10.0kb downstream 10.0kb downstream 12168 true Chr5: 3287781-3299948 Arabidopsis thaliana
AT5G10460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3289949-3299948 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371701 5261 Brassicaceae View MSA
123830460 5264 Brassicales-Malvales View MSA
124339444 5266 SBM View MSA
124238996 5268 Malvidae View MSA
124065933 5270 Rosid View MSA
123748691 5271 Pentapetalae View MSA
122789979 5272 Eudicot View MSA
122045507 5273 Angiosperm View MSA
121310456 5274 Embryophyte View MSA
123425342 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.675       High
cufflinks 10.56        
cufflinks 12.284       High
cufflinks 10.236        
cufflinks 10.106        
cufflinks 10.457        

0 Strain