Gene : HPA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G10330 Defline:  (1 of 2) 2.6.1.9 - Histidinol-phosphate transaminase / Imidazolylacetolphosphate aminotransferase
Genomic Order:  952 Name:  ? AT5G10330
Secondary Identifier:  ? PAC:19671429
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana HISTSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10330 0.5kb upstream 0.5kb upstream 2792 true Chr5: 3247847-3250638 Arabidopsis thaliana
AT5G10330 0.5kb upstream 0.5kb upstream 500 false Chr5: 3250139-3250638 Arabidopsis thaliana
AT5G10330 0.5kb downstream 0.5kb downstream 2792 true Chr5: 3247347-3250138 Arabidopsis thaliana
AT5G10330 0.5kb downstream 0.5kb downstream 500 false Chr5: 3247347-3247846 Arabidopsis thaliana
AT5G10330 1.0kb upstream 1.0kb upstream 3292 true Chr5: 3247847-3251138 Arabidopsis thaliana
AT5G10330 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3250139-3251138 Arabidopsis thaliana
AT5G10330 1.0kb downstream 1.0kb downstream 3292 true Chr5: 3246847-3250138 Arabidopsis thaliana
AT5G10330 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3246847-3247846 Arabidopsis thaliana
AT5G10330 2.0kb upstream 2.0kb upstream 4292 true Chr5: 3247847-3252138 Arabidopsis thaliana
AT5G10330 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3250139-3252138 Arabidopsis thaliana
AT5G10330 2.0kb downstream 2.0kb downstream 4292 true Chr5: 3245847-3250138 Arabidopsis thaliana
AT5G10330 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3245847-3247846 Arabidopsis thaliana
AT5G10330 5.0kb upstream 5.0kb upstream 7292 true Chr5: 3247847-3255138 Arabidopsis thaliana
AT5G10330 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3250139-3255138 Arabidopsis thaliana
AT5G10330 5.0kb downstream 5.0kb downstream 7292 true Chr5: 3242847-3250138 Arabidopsis thaliana
AT5G10330 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3242847-3247846 Arabidopsis thaliana
AT5G10330 10.0kb upstream 10.0kb upstream 12292 true Chr5: 3247847-3260138 Arabidopsis thaliana
AT5G10330 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3250139-3260138 Arabidopsis thaliana
AT5G10330 10.0kb downstream 10.0kb downstream 12292 true Chr5: 3237847-3250138 Arabidopsis thaliana
AT5G10330 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3237847-3247846 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375431 5261 Brassicaceae View MSA
123827771 5264 Brassicales-Malvales View MSA
124346298 5266 SBM View MSA
124251034 5268 Malvidae View MSA
124062361 5270 Rosid View MSA
123738410 5271 Pentapetalae View MSA
122789923 5272 Eudicot View MSA
122043706 5273 Angiosperm View MSA
121344225 5274 Embryophyte View MSA
123423969 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.717        
cufflinks 3.017        
cufflinks 2.466        
cufflinks 3.126        
cufflinks 2.106       Low
cufflinks 3.192        

0 Strain