Gene : FLC A. thaliana TAIR10
Primary Identifier:  ? AT5G10140 Defline:  (1 of 6) PTHR11945:SF221 - SERUM RESPONSE FACTOR
Genomic Order:  933 Name:  ? AT5G10140
Secondary Identifier:  ? PAC:19672039
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10140 0.5kb upstream 0.5kb upstream 6452 true Chr5: 3173497-3179948 Arabidopsis thaliana
AT5G10140 0.5kb upstream 0.5kb upstream 500 false Chr5: 3179449-3179948 Arabidopsis thaliana
AT5G10140 0.5kb downstream 0.5kb downstream 6452 true Chr5: 3172997-3179448 Arabidopsis thaliana
AT5G10140 0.5kb downstream 0.5kb downstream 500 false Chr5: 3172997-3173496 Arabidopsis thaliana
AT5G10140 1.0kb upstream 1.0kb upstream 6952 true Chr5: 3173497-3180448 Arabidopsis thaliana
AT5G10140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3179449-3180448 Arabidopsis thaliana
AT5G10140 1.0kb downstream 1.0kb downstream 6952 true Chr5: 3172497-3179448 Arabidopsis thaliana
AT5G10140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3172497-3173496 Arabidopsis thaliana
AT5G10140 2.0kb upstream 2.0kb upstream 7952 true Chr5: 3173497-3181448 Arabidopsis thaliana
AT5G10140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3179449-3181448 Arabidopsis thaliana
AT5G10140 2.0kb downstream 2.0kb downstream 7952 true Chr5: 3171497-3179448 Arabidopsis thaliana
AT5G10140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3171497-3173496 Arabidopsis thaliana
AT5G10140 5.0kb upstream 5.0kb upstream 10952 true Chr5: 3173497-3184448 Arabidopsis thaliana
AT5G10140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3179449-3184448 Arabidopsis thaliana
AT5G10140 5.0kb downstream 5.0kb downstream 10952 true Chr5: 3168497-3179448 Arabidopsis thaliana
AT5G10140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3168497-3173496 Arabidopsis thaliana
AT5G10140 10.0kb upstream 10.0kb upstream 15952 true Chr5: 3173497-3189448 Arabidopsis thaliana
AT5G10140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3179449-3189448 Arabidopsis thaliana
AT5G10140 10.0kb downstream 10.0kb downstream 15952 true Chr5: 3163497-3179448 Arabidopsis thaliana
AT5G10140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3163497-3173496 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361037 5261 Brassicaceae View MSA
123798090 5264 Brassicales-Malvales View MSA
124295768 5266 SBM View MSA
124250484 5268 Malvidae View MSA
124072265 5270 Rosid View MSA
123750627 5271 Pentapetalae View MSA
122793492 5272 Eudicot View MSA
122049609 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.051     Low  
cufflinks 0.003     Low  
cufflinks 0.07     Low High
cufflinks 0.004     Low  
cufflinks 0.05     Low  

0 Strain