Gene : TGA4 A. thaliana TAIR10
Primary Identifier:  ? AT5G10030 Defline:  (1 of 2) PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED
Genomic Order:  922 Name:  ? AT5G10030
Secondary Identifier:  ? PAC:19666126
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10030 0.5kb upstream 0.5kb upstream 7460 true Chr5: 3137310-3144769 Arabidopsis thaliana
AT5G10030 0.5kb upstream 0.5kb upstream 500 false Chr5: 3144270-3144769 Arabidopsis thaliana
AT5G10030 0.5kb downstream 0.5kb downstream 7460 true Chr5: 3136810-3144269 Arabidopsis thaliana
AT5G10030 0.5kb downstream 0.5kb downstream 500 false Chr5: 3136810-3137309 Arabidopsis thaliana
AT5G10030 1.0kb upstream 1.0kb upstream 7960 true Chr5: 3137310-3145269 Arabidopsis thaliana
AT5G10030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3144270-3145269 Arabidopsis thaliana
AT5G10030 1.0kb downstream 1.0kb downstream 7960 true Chr5: 3136310-3144269 Arabidopsis thaliana
AT5G10030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3136310-3137309 Arabidopsis thaliana
AT5G10030 2.0kb upstream 2.0kb upstream 8960 true Chr5: 3137310-3146269 Arabidopsis thaliana
AT5G10030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3144270-3146269 Arabidopsis thaliana
AT5G10030 2.0kb downstream 2.0kb downstream 8960 true Chr5: 3135310-3144269 Arabidopsis thaliana
AT5G10030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3135310-3137309 Arabidopsis thaliana
AT5G10030 5.0kb upstream 5.0kb upstream 11960 true Chr5: 3137310-3149269 Arabidopsis thaliana
AT5G10030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3144270-3149269 Arabidopsis thaliana
AT5G10030 5.0kb downstream 5.0kb downstream 11960 true Chr5: 3132310-3144269 Arabidopsis thaliana
AT5G10030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3132310-3137309 Arabidopsis thaliana
AT5G10030 10.0kb upstream 10.0kb upstream 16960 true Chr5: 3137310-3154269 Arabidopsis thaliana
AT5G10030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3144270-3154269 Arabidopsis thaliana
AT5G10030 10.0kb downstream 10.0kb downstream 16960 true Chr5: 3127310-3144269 Arabidopsis thaliana
AT5G10030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3127310-3137309 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377000 5261 Brassicaceae View MSA
123841519 5264 Brassicales-Malvales View MSA
124336651 5266 SBM View MSA
124237521 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.612        
cufflinks 3.289       High
cufflinks 1.274       Low
cufflinks 3.02        
cufflinks 1.199       Low
cufflinks 2.698        

0 Strain