Gene : HEC3 A. thaliana TAIR10
Primary Identifier:  ? AT5G09750 Defline:  (1 of 2) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED
Genomic Order:  889 Name:  ? AT5G09750
Secondary Identifier:  ? PAC:19667345
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09750 0.5kb upstream 0.5kb upstream 1175 true Chr5: 3026401-3027575 Arabidopsis thaliana
AT5G09750 0.5kb upstream 0.5kb upstream 500 false Chr5: 3027076-3027575 Arabidopsis thaliana
AT5G09750 0.5kb downstream 0.5kb downstream 1175 true Chr5: 3025901-3027075 Arabidopsis thaliana
AT5G09750 0.5kb downstream 0.5kb downstream 500 false Chr5: 3025901-3026400 Arabidopsis thaliana
AT5G09750 1.0kb upstream 1.0kb upstream 1675 true Chr5: 3026401-3028075 Arabidopsis thaliana
AT5G09750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3027076-3028075 Arabidopsis thaliana
AT5G09750 1.0kb downstream 1.0kb downstream 1675 true Chr5: 3025401-3027075 Arabidopsis thaliana
AT5G09750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3025401-3026400 Arabidopsis thaliana
AT5G09750 2.0kb upstream 2.0kb upstream 2675 true Chr5: 3026401-3029075 Arabidopsis thaliana
AT5G09750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3027076-3029075 Arabidopsis thaliana
AT5G09750 2.0kb downstream 2.0kb downstream 2675 true Chr5: 3024401-3027075 Arabidopsis thaliana
AT5G09750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3024401-3026400 Arabidopsis thaliana
AT5G09750 5.0kb upstream 5.0kb upstream 5675 true Chr5: 3026401-3032075 Arabidopsis thaliana
AT5G09750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3027076-3032075 Arabidopsis thaliana
AT5G09750 5.0kb downstream 5.0kb downstream 5675 true Chr5: 3021401-3027075 Arabidopsis thaliana
AT5G09750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3021401-3026400 Arabidopsis thaliana
AT5G09750 10.0kb upstream 10.0kb upstream 10675 true Chr5: 3026401-3037075 Arabidopsis thaliana
AT5G09750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3027076-3037075 Arabidopsis thaliana
AT5G09750 10.0kb downstream 10.0kb downstream 10675 true Chr5: 3016401-3027075 Arabidopsis thaliana
AT5G09750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3016401-3026400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374077 5261 Brassicaceae View MSA
123830128 5264 Brassicales-Malvales View MSA
124321656 5266 SBM View MSA
124245239 5268 Malvidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain